Detailed information of XP_065668317.1 in Hydra vulgaris

Genomic Location: NC_088931.1:13258935...13351962
NR annotation: XP_047126799.1, uncharacterized protein LOC100205900 [Hydra vulgaris]
Species Hydra vulgaris · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002595 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14545
all species →		DBBDof, BCAP, and BANK (DBB) motif,DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036770
all species →		Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR017893
all species →		DomainDBB domainInterproscan
IPR052446
all species →		FamilyB-cell PI3K Activation and Signaling AdaptersInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16267
all species →		BANK1/PIK3AP1 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005102
all species →		Molecular Functionsignaling receptor bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_065668317.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_065668317.1 across 60 RNA-seq samples of Hydra vulgaris. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

60Samples
0TPM > 0
8Conditions
0.0Max TPM
0.0Mean TPM

By condition

ConditionSamplesTPM > 0 Mean TPMMax TPMMean, relative to max
Regenerating head · dmso treatment 18 0 0.00 0.00
Regenerating head · 25uM U0126 treatment 15 0 0.00 0.00
Regenerating foot · dmso treatment 9 0 0.00 0.00
Regenerating foot · 25uM U0126 treatment 8 0 0.00 0.00
Regenerating head · u0126 treatment 3 0 0.00 0.00
Whole animal · 25uM U0126 treatment 3 0 0.00 0.00
Whole animal · dmso treatment 3 0 0.00 0.00
Regenerating foot · u0126 treatment 1 0 0.00 0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

Source: CnidoSite RNA-seq expression matrices (HVULG_TPM, StringTie quantification over 60 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.

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