Gene detail

Detailed information of XP_065668807.1 in Hydra vulgaris

Genomic Location: NC_088931.1:26584279...26638142
NR annotation: XP_012554405.1, F-BAR and double SH3 domains protein 2-like [Hydra vulgaris]
Species abbreviation HVULG · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065812735.1

AAATAGAATATTATGTAAACGGATAGAAGAACAAGAGAACTATGGTTTACAGGAGTTAAATTAcgaattgttataataaaaagattcattaaaaattgaagCAGATAATAATTCAgaaaccatttttattaatgtttaaagagAGTAGCTgtcttttaaagataatttataaaaattctgttAATCTGTAATagattctaaaatatttttttaataaaaatttaacaatagtCCTGGGTCCATACATTGCTATTTATAGATACATAAGTAATTGGAATGGCCCCACCACCTATTCCAGCTCATAgaaagGTGAAGTTAGTTACAGCATTAAAGAACAAGCTATCAGAACAAACTTCTAAGCTCCAAGTTAAACATCATGCAGAAAATGATCTTCTAGAAGATATACGATCATACACAAAGTTTAGAGCAGCTGCTGAAAAAGAATATGCTCAGgctcttttgaaaataactacTCAATTGTTAGCAAAAGTTCAAGTTAAagatgaagaagaagaaaaaaaATTACCTGATGGTCTTTGGCGTAAAGTACTTAAAGAAACAGAAAGTCTTGCAAACTCGCGTATGAAAATAGCTCAAACAATGATTGCTAGTGTTTCAGAAAGTATTAAGACTTTAAAAAGTGAAAGAGTAATCACaatgaaaaagAGTACTGCAATAGCAGAAAGAATTCATGAAGAACTACAAGCATCGGCTGCTGAACTcattaaaagTCAAAAGGTATACATGGAGGCTGAAAAATTAACTCTACAAGCAAAGGAACAAGCTGCAGAAGCTCAAGAACgATTGAAAAAAGGTTCTGTTGGTATATTTTCTTCAAGAGCAAAGTTAGAAAAGACTTCAACCAAGGCAAATGAGAAGTATGAAGTTTGTGAAAAAAGATCAACAATTGCTCGCAATGATTATCTACTGATGCTGGCTGCTATCAATGCTGAACAGCATAAGTACTACAAGAATGATTTACCAGGATTAATCGCTatgcaggatggtaatatttatgaaagttttCGGAATTTTTACACTATATTAACAAATGCTGAAATAGATGCATGTAACCAGAATCTTTCCAATTTTCGAAAGCTGGAAGAAGACGTGTCACagcttaacaAAGTTTATGCATTAGattattttcacaaaaagaATCCTGTATTTTCACAGTATGATACCTATTCTTTTAAACCAGTAACAGGTGACAAGATTTCGAGTATTAGTTTAGAATATGGCGCCAGTGTCGTTCTTGATAAAGAAGCAAGGAAATGGACTCTTCGTTATGTTAGAGAACAAAACATGattaaaaagaaacagaaaCAACTTTCCTCTCTTCAATcagataataataatgaaacaATTCCTGATCTCAATCCTgaagcttttaaattaaaagaacaaaatataGAAGCATTAGTTGAAGAAATTCGTCATCTAGAGGTGTTAATAGTTAAGGCTGAGGGAAGGATTCAATCTATGAGACTTGCTGGAGTTAATGTTGATGAGTGGCTTCAAAGTTCGTTATTAGAAAAACAGtcagatgatgatgatgatgatgatgacaattatAATCCTGATGATACTAATGATGACAGTAGATTCAGCAGTGGAAATAAtgATGACTTTGATGATAGTGAGTTTCCTGATGAAGATAAAACTTCATATCTTTACACACCTGTTATACCTGATGATACATTATCTGTTACATCATCAATTGATCAACAAAGAGTCTGTGTTACACAGGCGCTTGCTTTGTACACATTTCAGtcTACTTCTCAGGAAGAAATTTCAATTTCCAGTGGAGAAAAGATAGAAATTATAGAGTATGAAGGTGATGGGTGGTGTAAGGTACGTAATAAGGCAGGTCAGGTTGGGTATGTTCCAGAAGCATATATTCAACTAATCGATGCTAAAAATACTAGTACAGAAGACGACTtcatatgtTACGCGAAAGCTTTATATGATTACGATGCATGCGAAGAAGAAGAGCTTTCGTTTAAGGAAGGTGACTTCATTAAAGTTATAAGTCAGCAAGTTGACGACGATGATGGTTGGTGGATAGGTATTTACGAAGACCGGAAAGGTATTTTTCCAAATATTGTCGTTGAAGTCGTTGATAATAGTTAGCAATTGAAATGgaaacaattttctttattgttgcttacaaataaagaattttatcgtattgttttaataaagcaattttatCGTATAAATCTATTTATGAATGTTGAAAAAGctgtaaaattattattcagtTGTCTtgtacaatttattattttatttatttattttgactttactaggtttaataaaaaacggatttttgatttaaacaaaaaaagaaaccatgaaatcaaattataaatggTAATCATATTAGCTAAAATAGAAACAAGTATCTCttgtttctctttttaaaagcgatgaaaaatcctttttttaattacattttattttacgcTCGAATCTTAGTCAAAGCATTTTATGACGTAAGTCAATGACAACTTGTTAAAAAGTATACTTTAGGTCTGCTTTTATCTAGTTTTACGAaacttaaacaaacaaacaaacaaaaattctttttttgtttaacttaaaaaaaccttcaattttttttttctcacttcTCGCATAAATAGTGATAAACTTTGTTCATAGGTTTCctatttatttatcattctttttttttttttaattatttcttgaagaaattcatttaaaactttagtaattagtatgtatatttttacCAACAAGATTGACGCTAATTGTAAATTGCGATCAGATGAAATTTAATCCCtttgtaaattgtaaatttttgtaataaatagttttttttaattttgtattgtttaaatttagtttatgtttttctcaaatttgataaaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O94868	F-BAR and double SH3 domains protein 2 OS=Homo sapiens OX=9606 GN=FCHSD2 PE=1 SV=3
Q3USJ8	F-BAR and double SH3 domains protein 2 OS=Mus musculus OX=10090 GN=Fchsd2 PE=1 SV=2
X2JAU8	Protein nervous wreck OS=Drosophila melanogaster OX=7227 GN=nwk PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005621 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan
PF00611 all species →	FCH	Fes/CIP4, and EFC/F-BAR homology domain	Family	Interproscan
PF14604 all species →	SH3_9	Variant SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR001060 all species →	Domain	FCH domain	Interproscan
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR031160 all species →	Domain	F-BAR domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15735 all species →	FCH AND DOUBLE SH3 DOMAINS PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007274 all species →	Biological Process	neuromuscular synaptic transmission	Interproscan
GO:0030833 all species →	Biological Process	regulation of actin filament polymerization	Interproscan
GO:0031594 all species →	Cellular Component	neuromuscular junction	Interproscan
GO:0055037 all species →	Cellular Component	recycling endosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065668807.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.