Gene detail

Detailed information of ahya_s0050.g35.t1 in Acropora hyacinthus

Genomic Location: sc0000050_pilon:864211...881951
NR annotation: XP_044164428.1, uncharacterized protein LOC122948536 [Acropora millepora]
Species abbreviation AHYAC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ahya_s0050.g35.t1

ATGGCGGACTCTTCTTCATCGCAGTACGACCAGGAATCGAAGAAAGAAGCTCGATCAAAGCTCATCGAACATGCCGTAAGATGTCTCACCACGGAAAGGAGTACTTCGGTTTGTGTGAAACGAGATGATGTTGCACGAGTTTGGAAACAACTTCATGAATCTGGAAAAGCTGGGGAATATTTCACAGAAAAAGAAAGACAGGAAATAGAGGAGGAAATTGTTTATTGGGAGCATTTTCACGATAGCCAAGTTCAAACAAGAAGGCCATCTGACCTACGCGTGTGTTATCTTTGTGGTGAGAACCCAATAGATGATCTTGAAGTCCTTGAAGTCCTGGTTACAAATGGCGTTCTTTGCCAGAATGTATGGACAGTTGAGAAAGATTCGAAAAAATTAGAGAAAGGATGGAATGCGATCAAGAATCCCACATTGAGAAAAGTTAAACTATTCGATGGTGGCTTCCTTACTTTCTTGAAAGATTTCCCAGGACAGTTTGACATAATTTACTTCGATGCCTGCGGTTGTTTACCAGCAGCCAAAGAGAACACTCTGAAGGTCATCGGCTATGTGTTTCTGTACAACAAGCTTACGTCGCCTGGTGCCTTGATTACCAACTTTTCTTTCCCGCCTCAGGATACTCGGCAAGAGAATCCTGCAATTTCACAGGACGTTTATTTAGATAAAGAGAGAGAGATGATAAATGTCCTGGTAAAGGAGTATATGAATTACAGATTGTGTAACGTCTTAGGCAAAGAAAATAACGCAGAATATCTGAGTGAGAGGACTGATGATCATGAAGATAATTACGGAGACTACGTATCTTTTCAAGTTATTGATTCAGCCTATTTGTTTATTCCCGCTCAAAGAATACTGTGGTCAAAAAGGAAATTACTGTTGGGTCAAATCTTTAATTTCTCGTCAGAAGTGGAAAGCACAACCGAAGGCACCAATGAAAGAAGTACCAAAACAACAAGAAATCAAGAATTAATGGCATCACTGGAAGAGTTGAATGAGAAGTATGATAGGTTCCTGCATCAAAGAAAAATGGCAGGAATTGACCTTGAGAAATCAAATTCCTATTGTGAAGCATTTGTTGCTGAAATCTTCCCAGATTTGAAATCTTTGCCAAGGGAAGGAAATTCTTCTGTGCCTTCGACTCCTCTACCGTTTTCCTCTCCACATTACATCATACAGTTTTGTAAGGATTTATCAAAATGTCTTGTGCCACTTTTGAAAGCTGATGTTGATGAAAGGATTTTGAGTTGTTGCGATATGGCAACTCCTGAACAGATAATCTGCCATTTAGCTGATCTTCTTTATGGTCAAATGGCCTACCCATCATTTCCTGTTATGGATAAGCTGTTTCGTCTCAGGTACACTTCAGAGAAGAGGCAGATGTTTGGTGATGTTTTTGTTTTTGACAAGTGCAGGTATCTGTATGATCAATTCCTTTCTGTGGATTGTGCAGGCTTTGCTGAGCGAAAGCAGCAGATTCTATTTACAGTGGTGGTGGATGGTTTATGCAAGCATTTGGGAGGAATTTGTTCGGAAGATCTTTTCAAATTTTGCAATGTTGGACAAGGGTATGCGGTGATTACAGAGGGAGGAGCGATTTTTCCAAACAGTGTGGGGAGAATTCCAGAGAGGCAGAAAATAGAAGATATACTATTTAAAAAAGTAAAGAAAATCCAGGAGGAGGAGATCTCGTATAGCTTTGCTGCAACTGAAAGCCCTTGGGTAGTTACCAGTGCTGATAAGTTACGCTATGATGCTATTTTCAAGCAAGCTGACAAAGACGGAGATGGGCTTGTTTCTGGGGAAGATGTGAAGAGCACATTTATGGCCTCGGTTCTAGATGAGCAAATTCTTGCACACATTTGGGAACTCTGCGACATTACAAACCAAGGGCAGCTGAACTCCGAGGAGTTTGCATTGGCTATGTATCTAATTGACCAAAAGGACATGGGTGTGGATCCACCCCAGATGCTCAGCCCTGAGATGGTGCCACCCTCAAAGAGGGCAAGCAGTGCTGGTGGCCCTGTGGCAGCAGGAGAGCTACCTACCAGAGAGGACAGACAAGACGATGAATTACCGCCTCAAGACACTAGAACTCAGCGGGAAGTGGATCAATACGTGGGGCTCCACACAGATTTTGTTCAAGCAAAGCATCAGATAACTCCAAAAGAAGAAACGATGCCGAAAGAAGAAACGGTGCCGACAGACGACGGCACGAGCTCGAGTAACCGAGCTTTGGTCAAAGTGAAGCAAGGTCTTCACACTGTGAAAGTCTCTCAGTATGACGCGACTCAAGTGCAAAGGGAAATTGAGAGCGAACTATTTGACAAATGGCACGAGGGTTGTGAGGTGAGGGAAACCAAAGGAATTGCCATTGAGAATATCTACGACTTCCTGGATTATCTTCTGGAGGCTTATGAGGGCATTGACATAGCGATGAGAAAGAAACTTAACGGAATTCAGTGGGTAAAAGAATGGTCATATAAGATTGTGGAATTCAAGTACAACGCAGCAAGCGACTCTAGTGCCAGGTATGGAATGATAGCGTTTGGAAAATCCAAAGATGGAAGGTTTGTAGACTGCATGTACTGCCTCTACAACCTGGATTTCAAAGTTGCTCCTGAGAAAATCGTCACCAAAAAAGAGCATTCAATCTTGTGGGGTCTTTCCAAATGGGAACCTGTGCAAGAGAAAGTTCAGGAAAGAGTGCTTGGTGTGAAGTCGCTGAAGCGCATTAAGAATTTCTTCCGCTTCAAGGCCCTGGAAGGCTTCTACCAGGAAGGCCTTATCGACCAAATTAATGTGGTACCATCCCTTGAAGATGTGGTGGATGAGAAGTAG

Transcript

ahya_s0050.g35.t1

ataaatgttccgaacacaatccgaagattggaccaatcacggagttacactctccatgacacggtagctatttctcttctacgcaggaaagtggctacAAAATGGCCGACAGACCTGTACCAATTTGTCTACATAGCGTCAGCCATAGTGAACGACGCAGTTGTTCGTGGTAGTTCGTTATGGCGGACTCTTCTTCATCGCAGTACGACCAGGAATCGAAGAAAGAAGCTCGATCAAAGCTCATCGAACATGCCGTAAGATGTCTCACCACGGAAAGGAGTACTTCGGTTTGTGTGAAACGAGATGATGTTGCACGAGTTTGGAAACAACTTCATGAATCTGGAAAAGCTGGGGAATATTTCACAGAAAAAGAAAGACAGGAAATAGAGGAGGAAATTGTTTATTGGGAGCATTTTCACGATAGCCAAGTTCAAACAAGAAGGCCATCTGACCTACGCGTGTGTTATCTTTGTGGTGAGAACCCAATAGATGATCTTGAAGTCCTTGAAGTCCTGGTTACAAATGGCGTTCTTTGCCAGAATGTATGGACAGTTGAGAAAGATTCGAAAAAATTAGAGAAAGGATGGAATGCGATCAAGAATCCCACATTGAGAAAAGTTAAACTATTCGATGGTGGCTTCCTTACTTTCTTGAAAGATTTCCCAGGACAGTTTGACATAATTTACTTCGATGCCTGCGGTTGTTTACCAGCAGCCAAAGAGAACACTCTGAAGGTCATCGGCTATGTGTTTCTGTACAACAAGCTTACGTCGCCTGGTGCCTTGATTACCAACTTTTCTTTCCCGCCTCAGGATACTCGGCAAGAGAATCCTGCAATTTCACAGGACGTTTATTTAGATAAAGAGAGAGAGATGATAAATGTCCTGGTAAAGGAGTATATGAATTACAGATTGTGTAACGTCTTAGGCAAAGAAAATAACGCAGAATATCTGAGTGAGAGGACTGATGATCATGAAGATAATTACGGAGACTACGTATCTTTTCAAGTTATTGATTCAGCCTATTTGTTTATTCCCGCTCAAAGAATACTGTGGTCAAAAAGGAAATTACTGTTGGGTCAAATCTTTAATTTCTCGTCAGAAGTGGAAAGCACAACCGAAGGCACCAATGAAAGAAGTACCAAAACAACAAGAAATCAAGAATTAATGGCATCACTGGAAGAGTTGAATGAGAAGTATGATAGGTTCCTGCATCAAAGAAAAATGGCAGGAATTGACCTTGAGAAATCAAATTCCTATTGTGAAGCATTTGTTGCTGAAATCTTCCCAGATTTGAAATCTTTGCCAAGGGAAGGAAATTCTTCTGTGCCTTCGACTCCTCTACCGTTTTCCTCTCCACATTACATCATACAGTTTTGTAAGGATTTATCAAAATGTCTTGTGCCACTTTTGAAAGCTGATGTTGATGAAAGGATTTTGAGTTGTTGCGATATGGCAACTCCTGAACAGATAATCTGCCATTTAGCTGATCTTCTTTATGGTCAAATGGCCTACCCATCATTTCCTGTTATGGATAAGCTGTTTCGTCTCAGGTACACTTCAGAGAAGAGGCAGATGTTTGGTGATGTTTTTGTTTTTGACAAGTGCAGGTATCTGTATGATCAATTCCTTTCTGTGGATTGTGCAGGCTTTGCTGAGCGAAAGCAGCAGATTCTATTTACAGTGGTGGTGGATGGTTTATGCAAGCATTTGGGAGGAATTTGTTCGGAAGATCTTTTCAAATTTTGCAATGTTGGACAAGGGTATGCGGTGATTACAGAGGGAGGAGCGATTTTTCCAAACAGTGTGGGGAGAATTCCAGAGAGGCAGAAAATAGAAGATATACTATTTAAAAAAGTAAAGAAAATCCAGGAGGAGGAGATCTCGTATAGCTTTGCTGCAACTGAAAGCCCTTGGGTAGTTACCAGTGCTGATAAGTTACGCTATGATGCTATTTTCAAGCAAGCTGACAAAGACGGAGATGGGCTTGTTTCTGGGGAAGATGTGAAGAGCACATTTATGGCCTCGGTTCTAGATGAGCAAATTCTTGCACACATTTGGGAACTCTGCGACATTACAAACCAAGGGCAGCTGAACTCCGAGGAGTTTGCATTGGCTATGTATCTAATTGACCAAAAGGACATGGGTGTGGATCCACCCCAGATGCTCAGCCCTGAGATGGTGCCACCCTCAAAGAGGGCAAGCAGTGCTGGTGGCCCTGTGGCAGCAGGAGAGCTACCTACCAGAGAGGACAGACAAGACGATGAATTACCGCCTCAAGACACTAGAACTCAGCGGGAAGTGGATCAATACGTGGGGCTCCACACAGATTTTGTTCAAGCAAAGCATCAGATAACTCCAAAAGAAGAAACGATGCCGAAAGAAGAAACGGTGCCGACAGACGACGGCACGAGCTCGAGTAACCGAGCTTTGGTCAAAGTGAAGCAAGGTCTTCACACTGTGAAAGTCTCTCAGTATGACGCGACTCAAGTGCAAAGGGAAATTGAGAGCGAACTATTTGACAAATGGCACGAGGGTTGTGAGGTGAGGGAAACCAAAGGAATTGCCATTGAGAATATCTACGACTTCCTGGATTATCTTCTGGAGGCTTATGAGGGCATTGACATAGCGATGAGAAAGAAACTTAACGGAATTCAGTGGGTAAAAGAATGGTCATATAAGATTGTGGAATTCAAGTACAACGCAGCAAGCGACTCTAGTGCCAGGTATGGAATGATAGCGTTTGGAAAATCCAAAGATGGAAGGTTTGTAGACTGCATGTACTGCCTCTACAACCTGGATTTCAAAGTTGCTCCTGAGAAAATCGTCACCAAAAAAGAGCATTCAATCTTGTGGGGTCTTTCCAAATGGGAACCTGTGCAAGAGAAAGTTCAGGAAAGAGTGCTTGGTGTGAAGTCGCTGAAGCGCATTAAGAATTTCTTCCGCTTCAAGGCCCTGGAAGGCTTCTACCAGGAAGGCCTTATCGACCAAATTAATGTGGTACCATCCCTTGAAGATGTGGTGGATGAGAAGTAGAGGAAACGTTTGTGGTGCCGAACATGGCCAATTCTAATTTGAAATTCATCTTAACCATTTATTTCACTGAAATTAAGGGGACACCTACAACCAGTGTGCACTGCGGCCGTGCACTTCACCGAAAGCATTTTCTGTCAGTCTGTCCGCTTTGAATACAGATATTACGAACGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UBC2	Epidermal growth factor receptor substrate 15-like 1 OS=Homo sapiens OX=9606 GN=EPS15L1 PE=1 SV=1
Q60902	Epidermal growth factor receptor substrate 15-like 1 OS=Mus musculus OX=10090 GN=Eps15l1 PE=1 SV=3
P42566	Epidermal growth factor receptor substrate 15 OS=Homo sapiens OX=9606 GN=EPS15 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005831 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12763 all species →	EF-hand_4	Cytoskeletal-regulatory complex EF hand	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000261 all species →	Domain	EH domain	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11216 all species →	EH DOMAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan
GO:0016197 all species →	Biological Process	endosomal transport	Interproscan
GO:0030132 all species →	Cellular Component	clathrin coat of coated pit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ahya_s0050.g35.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.