Gene detail

Detailed information of ahya_s0112.g70.t1 in Acropora hyacinthus

Genomic Location: sc0000112_pilon:1063935...1073749
NR annotation: XP_044178102.1, CAAX prenyl protease 1 homolog [Acropora millepora]
Species abbreviation AHYAC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ahya_s0112.g70.t1

CACTTACTTTCAAATTTCAAAATGGTGGACGTGTTACTTGCTGTAGTTTTATTTCTGTGGCTAACATATGTATGGGAAAACTACCTTTCCTACCGTCAGCATAAAGTTTTGAAGTACACCAAGGATGTTCCGGATGAACTTAAGGATGTCTTGGATCATGAGTCATTTGAGAAAGCAAGAGTTTATCAGCTAGATCGCTCCTCATTTAGCTTTTTTTCAGGAACATGGTCTCAAATTGAAACAACGCTGATCCTTTTGCTGGGAGGAATTCCTTTTGTTTGGGAAATATCAGGAGTGGTAATTTCAAAGTTTGGTTACACCAGAGAATATGAGATTACTCAGTCTTTGGTCTTCATGCTGCTTGCTATGCTTTTTAGCACGATCACTGATCTTCCATGGAGTCTCTACAGCACATTTGTTATTGAGGAGAAGCATGGCTTCAACAAGCAGACTCTTGGATTCTTTCTCAAGGATCTCTTGAAAAAATTAGCTGTTATGACAGCCATATCTCTTCCATTAGTCGCTGCACTACTGTACATCATCAAATGGGGCGGGGAGTACTTCTTTGTCTACACCTGGCTTTTCACACTGGTTGTAACTTTGGCCTTAGTGACCATCTACATGGATTATATTGCTCCTCTGTTTGACAAGTTCACTCTTCTTCCGGAAGGAACATTGCGCTCTTCGATCGAGCAGCTGGCGGCCAGGATCTCGTTTCCTTTAGCCAAGATTTACATTGTGGATGGTTCCAAGAGATCGTCTCATAGCAATGCTTACTTTTATGGATTCTTTAAGAACAAGAGAATTGTACTGTTTGACACTTTGCTGTCAGAAAATCCGACAAaggaagaaaatgatacaagcaaagaagatggaacggaaaatgataaagagaacgaaggagacaaggggaaagaggagggaaacgagaaagaTCCAAAGCAGGAGGACTCAAATGCCGGCGATGGCGAGAAAAAGAAGTCCAAGGGCTGTTCAAATGACGAAATACTGGCGATATTAGGACATGAACTGGGTCACTGGAAACTGAGTCACACTCTAAAGAACCTTGGCATTTCACAGGTTAATATTTTCTTTTCGTTTATGATATTCGGGTATCTGATGCATAACAAGACGCTGTTTGCAAGTTTTGGTTTCCCTGATTCTCAACCCACTTTGATCGGGTTAATGATTATATTCCAGttcattttctcaccctacaatgagCTGTTAGGCTTTTTTATGACTGCGCTCAGTCGGAAGTTTGAATTTCAAGCGGATGACTTCGCGAAGGGCCTAGGATTTGCTGGTTATCTTCGCTCCTCTCTCGTAAAGCTACACAAAGATAATCTTGGCTTTCCCGTGGCAGACAAGCTTTATTCGGCATACCACTACTCGCATCCTCCGCTGATTGAGCGACTCAGAGCATTGGGACCGAAACAAGACTAAATCATCATTGAAACTATGGGATGATTGGTCGAAACAAATTCAAATTCAATCCCATCATTCTCAACCTTCTGGGTTAAATATCTTTGCACCGAGGCTAGGTACAGGCCACTCTTAACCATAGAGATTTCAAATAATATTAATGCATGCCATTGGACAATGATGTTCACATTGCTGTCCACCCTATTACATTATGAGAGCTAATGTTACTTGAAACCTCTAGAATCCGCCTCATCACGTGAGCGTTCGCCATATTGGTTTACTGAACTGCCAATGAAATTGTTTGCGTTGAAGTATATTTGCAGTCCTAGAAAGAATGTTTTTTTTCTTGAAATGTCTGTGGTCTCCCTTTCGATTTTCCTCCTTTTTTTGTTTCCTTGAAACATAAGTGTGCGCATTTTTTATCCTGAGCTGTCGCTTCCATCATTTTGATTCAACTTTACTTATTTATCGCATTGCCTTACTTATTATGACACAAAGACTAACTTGGGCAAAAATTTTTTTGGGGGGTTTATCGGCACAAAAGTGTTTCGTATATGATCATTATACATCATCGGTTCGGACGGAGCGAGAGTTTACTCGCGAAGCTTGTCAGGTGCCCCAATAACTAAATGGAGCTTTAAAGAATCTATAACAAGTGTTCTTGCATGAGTGGAGTTCGTGCTATCCACAAGTCACACAATGTCAGGTATTGTTTTCAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O75844	CAAX prenyl protease 1 homolog OS=Homo sapiens OX=9606 GN=ZMPSTE24 PE=1 SV=2
Q80W54	CAAX prenyl protease 1 homolog OS=Mus musculus OX=10090 GN=Zmpste24 PE=1 SV=2
Q3Y6B8	CAAX prenyl protease 1 homolog OS=Taenia solium OX=6204 GN=TsSte24p PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006138 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01435 all species →	Peptidase_M48	Peptidase family M48	Domain	Interproscan
PF16491 all species →	Peptidase_M48_N	CAAX prenyl protease N-terminal, five membrane helices	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001915 all species →	Domain	Peptidase M48	Interproscan
IPR032456 all species →	Domain	CAAX prenyl protease 1, N-terminal	Interproscan
IPR027057 all species →	Family	CAAX prenyl protease 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10120 all species →	CAAX PRENYL PROTEASE 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004222 all species →	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0030176 all species →	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0071586 all species →	Biological Process	CAAX-box protein processing	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008233 all species →	Molecular Function	peptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06013	STE24; STE24 endopeptidase	EC:3.4.24.84	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.