Detailed information of c0185.g013.t3 in Palythoa umbrosa

Genomic Location: c0185:96097...106827
NR annotation: XP_032240911.1, procollagen galactosyltransferase 1 isoform X1 [Nematostella vectensis]
Species Palythoa umbrosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0JPH3Procollagen galactosyltransferase 1-A OS=Xenopus laevis OX=8355 GN=colgalt1-a PE=2 SV=1
A5PK45Procollagen galactosyltransferase 1 OS=Bos taurus OX=9913 GN=COLGALT1 PE=2 SV=1
Q8IYK4Procollagen galactosyltransferase 2 OS=Homo sapiens OX=9606 GN=COLGALT2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003179 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13704
all species →		Glyco_tranf_2_4Glycosyl transferase family 2FamilyInterproscan
PF01755
all species →		Glyco_transf_25Glycosyltransferase family 25 (LPS biosynthesis protein)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002654
all species →		FamilyGlycosyl transferase, family 25Interproscan
IPR029044
all species →		Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR000629
all species →		Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan
IPR050757
all species →		FamilyCollagen-modifying Glycosyltransferase 25Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10730
all species →		PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0050211
all species →		Molecular Functionprocollagen galactosyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11703GLT25D; collagen beta-1,O-galactosyltransferaseEC:2.4.1.50
Glycosyltransferasesko01003deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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