Gene detail

Detailed information of c0195.g021.t1 in Palythoa umbrosa

Genomic Location: c0195:242192...245112
NR annotation: OGZ44494.1, hypothetical protein A2719_05220 [Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_45_22]
Species Palythoa umbrosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q748B2	Release factor glutamine methyltransferase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=prmC PE=3 SV=1
Q74IX0	Ribosomal protein L11 methyltransferase OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533) OX=257314 GN=prmA PE=3 SV=1
A7MXM2	tRNA1(Val) (adenine(37)-N6)-methyltransferase OS=Vibrio campbellii (strain ATCC BAA-1116) OX=2902295 GN=VIBHAR_00953 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006889 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05175 all species →	MTS	Methyltransferase small domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR050320 all species →	Family	Protein N5-glutamine methyltransferase	Interproscan
IPR007848 all species →	Domain	Methyltransferase small domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18895 all species →	HEMK METHYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008168 all species →	Molecular Function	methyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02493	hemK, prmC, HEMK; release factor glutamine methyltransferase	EC:2.1.1.297	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.