Detailed information of c1929.g001.t1 in Palythoa umbrosa

Genomic Location: c1929:1502...11913
NR annotation: XP_027059902.1, jasmonic acid-amido synthetase JAR1-like [Pocillopora damicornis]
Species Palythoa umbrosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O82333Probable indole-3-acetic acid-amido synthetase GH3.1 OS=Arabidopsis thaliana OX=3702 GN=GH3.1 PE=2 SV=1
O22190Indole-3-acetic acid-amido synthetase GH3.3 OS=Arabidopsis thaliana OX=3702 GN=GH3.3 PE=1 SV=1
A3BLS0Indole-3-acetic acid-amido synthetase GH3.8 OS=Oryza sativa subsp. indica OX=39946 GN=GH3.8 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004748 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03321
all species →		GH3GH3 auxin-responsive promoterFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004993
all species →		FamilyGH3 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31901
all species →		GH3 DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016881
all species →		Molecular Functionacid-amino acid ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for c1929.g001.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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