Gene detail

Detailed information of c1951.g002.t1 in Palythoa umbrosa

Genomic Location: c1951:11203...12411
NR annotation: WP_027063432.1, arginine deiminase [Mesoplasma seiffertii]
Species Palythoa umbrosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2ST29	Arginine deiminase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) OX=340047 GN=arcA PE=3 SV=1
P0C2E1	Arginine deiminase OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=arcA PE=3 SV=1
Q0TUR5	Arginine deiminase OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=arcA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0024259 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02274 all species →	ADI	Arginine deiminase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003876 all species →	Family	Arginine deiminase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47271 all species →	ARGININE DEIMINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016990 all species →	Molecular Function	arginine deiminase activity	Interproscan
GO:0019546 all species →	Biological Process	arginine deiminase pathway	Interproscan
GO:0006527 all species →	Biological Process	arginine catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01478	arcA; arginine deiminase	EC:3.5.3.6	Arginine biosynthesis	ko00220	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.