Detailed information of c1951.g003.t1 in Palythoa umbrosa

Genomic Location: c1951:12517...13455
NR annotation: WHP39266.1, MAG: FAD-dependent oxidoreductase [Mollicutes bacterium]
Species Palythoa umbrosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P2316034.2 kDa protein in rubredoxin operon OS=Clostridium pasteurianum OX=1501 PE=3 SV=1
Q58931Putative thioredoxin reductase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1536 PE=3 SV=1
P75531Thioredoxin reductase OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) OX=272634 GN=trxB PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0014885 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07992
all species →		Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036188
all species →		Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR008255
all species →		Active_sitePyridine nucleotide-disulphide oxidoreductase, class-II, active siteInterproscan
IPR023753
all species →		DomainFAD/NAD(P)-binding domainInterproscan
IPR050097
all species →		FamilyFerredoxin--NADP reductase type 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48105
all species →		THIOREDOXIN REDUCTASE 1-RELATED-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0004791
all species →		Molecular Functionthioredoxin-disulfide reductase (NADPH) activityInterproscan
GO:0045454
all species →		Biological Processcell redox homeostasisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00384trxB, TRR; thioredoxin reductase (NADPH)EC:1.8.1.9
Selenocompound metabolismko00450deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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