Detailed information of c1966.g003.t1 in Palythoa umbrosa

Genomic Location: c1966:12160...21803
NR annotation: EDO41428.1, predicted protein [Nematostella vectensis]
Species Palythoa umbrosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9R0E1Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Mus musculus OX=10090 GN=Plod3 PE=1 SV=1
O60568Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Homo sapiens OX=9606 GN=PLOD3 PE=1 SV=1
Q5R6K5Multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 OS=Pongo abelii OX=9601 GN=PLOD3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004076 (this species only)

 Pfam domain
No Pfam domain signature was detected for c1966.g003.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR050757
all species →		FamilyCollagen-modifying Glycosyltransferase 25Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10730
all species →		PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0008475
all species →		Molecular Functionprocollagen-lysine 5-dioxygenase activityInterproscan
GO:0017185
all species →		Biological Processpeptidyl-lysine hydroxylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for c1966.g003.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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