Detailed information of evm.model.Ap1.1020 in Astrangia poculata

Genomic Location: Ap1:9908327...9910622
NR annotation: XP_020624843.1, leucine-rich repeat-containing protein 74B-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0JPI9Leucine-rich repeat-containing protein 74A OS=Rattus norvegicus OX=10116 GN=Lrrc74a PE=2 SV=1
Q0VAA2Leucine-rich repeat-containing protein 74A OS=Homo sapiens OX=9606 GN=LRRC74A PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008881 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516
all species →		LRR_6Leucine Rich repeatRepeatInterproscan
PF13499
all species →		EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan
IPR052394
all species →		FamilyLeucine-rich repeat-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24114
all species →		LEUCINE RICH REPEAT FAMILY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.1020.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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