Detailed information of evm.model.Ap1.1099 in Astrangia poculata

Genomic Location: Ap1:10849432...10854169
NR annotation: KAJ7365761.1, Thioredoxin-like protein 1 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006386 (this species only)
Ubiquitin familyULD|UFD|UBX · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00789
all species →		UBXUBX domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001012
all species →		DomainUBX domainInterproscan
IPR000626
all species →		DomainUbiquitin-like domainInterproscan
IPR029071
all species →		Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR050730
all species →		FamilyUBX domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23322
all species →		FAS-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0043130
all species →		Molecular Functionubiquitin bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.1099.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP