Detailed information of evm.model.Ap1.1100 in Astrangia poculata

Genomic Location: Ap1:10855902...10859113
NR annotation: XP_020621132.1, thioredoxin Y, chloroplastic-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O22263Protein disulfide-isomerase like 2-1 OS=Arabidopsis thaliana OX=3702 GN=PDIL2-1 PE=2 SV=1
Q942L2Protein disulfide isomerase-like 2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PDIL2-2 PE=2 SV=1
Q5XHX6Thioredoxin domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Txndc2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006386 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00085
all species →		ThioredoxinThioredoxinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036249
all species →		Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR013766
all species →		DomainThioredoxin domainInterproscan
IPR050620
all species →		FamilyThioredoxin-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10438
all species →		THIOREDOXINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap1.1100. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.1100.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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