Detailed information of evm.model.Ap1.1487 in Astrangia poculata

Genomic Location: Ap1:15039409...15089128
NR annotation: KAJ7365872.1, hypothetical protein OS493_002594 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A2RRP1NBAS subunit of NRZ tethering complex OS=Homo sapiens OX=9606 GN=NBAS PE=1 SV=2
Q5TYW4NBAS subunit of NRZ tethering complex OS=Danio rerio OX=7955 GN=nbas PE=2 SV=1
Q9FIN7MAG2-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=MIP2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002303 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15492
all species →
Nbas_NNeuroblastoma-amplified sequence, N terminalRepeatInterproscan
PF08314
all species →
Sec39Secretory pathway protein Sec39FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR029145
all species →
DomainNeuroblastoma-amplified sequence, N-terminalInterproscan
IPR013244
all species →
DomainSec39 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15922
all species →
NEUROBLASTOMA-AMPLIFIED SEQUENCEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0006890
all species →
Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0000149
all species →
Molecular FunctionSNARE bindingInterproscan
GO:0070939
all species →
Cellular ComponentDsl1/NZR complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20473NBAS; neuroblastoma-amplified sequence-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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