Detailed information of evm.model.Ap1.1581 in Astrangia poculata

Genomic Location: Ap1:16033156...16040510
NR annotation: XP_020603163.1, zinc finger RNA-binding protein-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96KR1Zinc finger RNA-binding protein OS=Homo sapiens OX=9606 GN=ZFR PE=1 SV=2
Q5REX3Zinc finger RNA-binding protein OS=Pongo abelii OX=9601 GN=ZFR PE=2 SV=1
Q562A2Zinc finger RNA-binding protein OS=Rattus norvegicus OX=10116 GN=Zfr PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003209 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20965
all species →		DZF_CDZF C-terminal domainDomainInterproscan
PF07528
all species →		DZF_NDZF N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049402
all species →		DomainDZF domain, C-terminalInterproscan
IPR006561
all species →		DomainDZF domainInterproscan
IPR049401
all species →		DomainDZF domain, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45762
all species →		ZINC FINGER RNA-BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003725
all species →		Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0003727
all species →		Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0071011
all species →		Cellular Componentprecatalytic spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.1581.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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