Detailed information of evm.model.Ap1.1609 in Astrangia poculata

Genomic Location: Ap1:16424405...16427816
NR annotation: XP_020629518.1, FAD-linked oxidoreductase DDB_G0289697-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q54H55FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0289697 PE=2 SV=1
Q796Y5Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) OX=224308 GN=ygaK PE=3 SV=4
A0A2V5HCN7FAD-linked oxidoreductase pyvE OS=Aspergillus violaceofuscus (strain CBS 115571) OX=1450538 GN=pyvE PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002281 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08031
all species →		BBEBerberine and berberine like DomainInterproscan
PF01565
all species →		FAD_binding_4FAD binding domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012951
all species →		DomainBerberine/berberine-likeInterproscan
IPR036318
all species →		Homologous_superfamilyFAD-binding, type PCMH-like superfamilyInterproscan
IPR016167
all species →		Homologous_superfamilyFAD-binding, type PCMH, subdomain 1Interproscan
IPR006093
all species →		Binding_siteOxygen oxidoreductase covalent FAD-binding siteInterproscan
IPR016169
all species →		Homologous_superfamilyFAD-binding, type PCMH, subdomain 2Interproscan
IPR006094
all species →		DomainFAD linked oxidase, N-terminalInterproscan
IPR016166
all species →		DomainFAD-binding domain, PCMH-typeInterproscan
IPR050416
all species →		FamilyFAD-linked Oxidoreductases in Biosynthetic PathwaysInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42973
all species →		BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G17690)-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0050660
all species →		Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0071949
all species →		Molecular FunctionFAD bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.1609.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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