Detailed information of evm.model.Ap1.1712 in Astrangia poculata

Genomic Location: Ap1:17866725...17878323
NR annotation: KAJ7389326.1, Zinc finger, CCHC domain-containing protein [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2HJ44Poly(A) RNA polymerase GLD2 OS=Bos taurus OX=9913 GN=TENT2 PE=2 SV=1
Q6PIY7Poly(A) RNA polymerase GLD2 OS=Homo sapiens OX=9606 GN=TENT2 PE=1 SV=1
Q641A1Poly(A) RNA polymerase GLD2-A OS=Xenopus laevis OX=8355 GN=tent2-a PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001333 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19088
all species →
TUTaseTUTase nucleotidyltransferase domainDomainInterproscan
PF03828
all species →
PAP_assocCid1 family poly A polymeraseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043519
all species →
Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR045100
all species →
DomainTUTase nucleotidyltransferase domainInterproscan
IPR002058
all species →
DomainPAP/25A-associatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12271
all species →
POLY A POLYMERASE CID PAP -RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004652
all species →
Molecular Functionobsolete polynucleotide adenylyltransferase activityInterproscan
GO:0006378
all species →
Biological Processobsolete mRNA polyadenylationInterproscan
GO:0016779
all species →
Molecular Functionnucleotidyltransferase activityInterproscan
GO:0031123
all species →
Biological ProcessRNA 3'-end processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.1712.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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