Gene detail

Detailed information of evm.model.Ap1.2108 in Astrangia poculata

Genomic Location: Ap1:21953871...21960700
NR annotation: XP_020601218.1, glycosaminoglycan xylosylkinase-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O75063	Glycosaminoglycan xylosylkinase OS=Homo sapiens OX=9606 GN=FAM20B PE=1 SV=1
Q8VCS3	Glycosaminoglycan xylosylkinase OS=Mus musculus OX=10090 GN=Fam20b PE=1 SV=1
Q5RH51	Glycosaminoglycan xylosylkinase OS=Danio rerio OX=7955 GN=fam20b PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006682 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06702 all species →	Fam20C	Golgi casein kinase, C-terminal, Fam20	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009581 all species →	Domain	FAM20, C-terminal	Interproscan
IPR024869 all species →	Family	FAM20	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12450 all species →	DENTIN MATRIX PROTEIN 4 PROTEIN FAM20	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0016773 all species →	Molecular Function	phosphotransferase activity, alcohol group as acceptor	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20825	FAM20B; glycosaminoglycan xylosylkinase	EC:2.7.1.-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.