Detailed information of evm.model.Ap1.2211 in Astrangia poculata

Genomic Location: Ap1:23126506...23135541
NR annotation: EDO46701.1, predicted protein [Nematostella vectensis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P25291Pancreatic secretory granule membrane major glycoprotein GP2 OS=Canis lupus familiaris OX=9615 GN=GP2 PE=1 SV=1
P19218Pancreatic secretory granule membrane major glycoprotein GP2 OS=Rattus norvegicus OX=10116 GN=Gp2 PE=1 SV=1
P48733Uromodulin OS=Bos taurus OX=9913 GN=UMOD PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000034 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19028
all species →		TSP1_spondinSpondin-like TSP1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR044004
all species →		DomainSpondin-like TSP1 domainInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR36191
all species →		ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap1.2211. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.2211.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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