Detailed information of evm.model.Ap1.2375 in Astrangia poculata

Genomic Location: Ap1:24679219...24706899
NR annotation: CAH3038425.1, unnamed protein product [Pocillopora meandrina]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UGM3Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Homo sapiens OX=9606 GN=DMBT1 PE=1 SV=2
A1L0T3Scavenger receptor cysteine-rich domain-containing group B protein OS=Mus musculus OX=10090 GN=Ssc4d PE=2 SV=2
Q95218Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Oryctolagus cuniculus OX=9986 GN=Dmbt1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002128 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530
all species →		SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF14670
all species →		FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan
PF00058
all species →		Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036772
all species →		Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR001190
all species →		DomainSRCR domainInterproscan
IPR000033
all species →		RepeatLDLR class B repeatInterproscan
IPR011042
all species →		Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR050778
all species →		FamilyCueball/EGF/LRP/NidogenInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR017448
all species →		DomainSRCR-like domainInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46513
all species →		VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.2375.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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