Detailed information of evm.model.Ap1.2546 in Astrangia poculata

Genomic Location: Ap1:26214109...26219288
NR annotation: XP_020627002.1, cilia- and flagella-associated protein 53-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A974E306Cilia- and flagella-associated protein 53 OS=Xenopus laevis OX=8355 GN=cfap53.L PE=2 SV=1
A0A0R4IFG5Cilia- and flagella-associated protein 53 OS=Danio rerio OX=7955 GN=cfap53 PE=2 SV=1
Q9D439Cilia- and flagella-associated protein 53 OS=Mus musculus OX=10090 GN=Cfap53 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008321 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13868
all species →		TPHTrichohyalin-plectin-homology domainCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043596
all species →		FamilyCFAP53/TCHPInterproscan
IPR043597
all species →		DomainTrichohyalin-plectin-homology domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31183
all species →		TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBERInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap1.2546. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24225CFAP53; cilia- and flagella-associated protein 53-Cilium and associated proteinsko03037deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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