Detailed information of evm.model.Ap1.2573 in Astrangia poculata

Genomic Location: Ap1:26410984...26413611
NR annotation: CAH3041259.1, unnamed protein product, partial [Porites lobata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3T0X5Proteasome subunit alpha type-1 OS=Bos taurus OX=9913 GN=PSMA1 PE=1 SV=1
P25786Proteasome subunit alpha type-1 OS=Homo sapiens OX=9606 GN=PSMA1 PE=1 SV=1
Q9R1P4Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006400 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00227
all species →		ProteasomeProteasome subunitDomainInterproscan
PF10584
all species →		Proteasome_A_NProteasome subunit A N-terminal signatureFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000426
all species →		DomainProteasome alpha-subunit, N-terminal domainInterproscan
IPR001353
all species →		FamilyProteasome, subunit alpha/betaInterproscan
IPR029055
all species →		Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR050115
all species →		FamilyProteasome subunit alphaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11599
all species →		PROTEASOME SUBUNIT ALPHA/BETAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006511
all species →		Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0019773
all species →		Cellular Componentproteasome core complex, alpha-subunit complexInterproscan
GO:0005839
all species →		Cellular Componentproteasome core complexInterproscan
GO:0051603
all species →		Biological Processproteolysis involved in protein catabolic processInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0010498
all species →		Biological Processproteasomal protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.2573.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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