Gene detail

Detailed information of evm.model.Ap1.2595 in Astrangia poculata

Genomic Location: Ap1:26621745...26655811
NR annotation: XP_022781853.1, kinesin-like protein unc-104 [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap1.2595

atgtcgtccgtgaaggtagctgtgcgagtgaggcccttcgcgagccgagaaaacaatcgaggcagcaaatgtataattgggatgcacggagccacaacgactatcctgaacccaagaaacctgagtgaaaagcctaagagttttacttttgattattcttattggtctcataatgagaatgatcaccattttgcatcgcagaagaaagtctatgcagatattggcaaagaaatgttggcacatgcatttgaaggatacaacatctgtatatttgcatatggccagacagggtcaggaaagtcctacacaatgatgggcaaacaagaagttgaccagaaaggaatcataccacagctctgcgaagagctgtttcaaaagattgacagtgagagcagtgaggagatgacgttatctgctgaggttagctatcttgaaatctactgtgagagagtgcgagatttactgagtccaagtgccaaaaacaatttgagagtgagggaacacccaatgttaggaccatatgtagaggatctgactaaacttgctgtcacttcatttgctgacataaacgaccttattgatgaaggcaacaaagccaggacagtagctgccacaaacatgaatgaaaccagcagtagatctcatgcaatttttagtattgtgtttacacagcgaagacatgacaccttatcagacctttcatcagctaaggtaagcaagctgagcttggtggaccttgccggcagtgagagggcagatgcaacaggtgctaaaggggagagactcaaggaaggtgcaaacatcaacaaatcattgactactctggggaaggtgatctccgctttagctgaacagtcttctcataagaagaaaaggagatcagatttcataccatacagagattctgtcctgacctggctcctaaaggaaaatctaggtggtaactcaaagacagccatgattgcagctataagtccagcagacattaattttgaggaaactttgagtacattaagatatgctgatcgtgcaaaacagattttatgtaaagctattgtcaatgaggatcctaatgcaaagattattcgagaattaaaagaagaagtatcaaaactgaaagatcttcttctcaaggaaggctacaatcctgatgatctgcaatctgttctaaaacaaggttccacccacttgcccagaagatatagccaagagttccaggatggaaccttagagaggcttaaggtatcagagaaacttatcgctgagctcaatgaaacctgggaagagaaactaagaaaaacagaagcgatcaagcaggagagagaggcgatgctagctgaaatgggtgtagctattggtgtggatggccatacagttggactatttcaacctagaaggagacctcatttggtgaatttaaatgaagatcctttgatgtctgaatgtcttctttactatgtaaaggatgggatgacaagggttggccaagccagagcaaaaagtcatcaagatattcagctgagtggcgagaatattcttgatgagcattgtctcttggaacatattcaaggcaagtgtactctttttgttgtacagcttatatctgtatcacatacgtcagggtattacaatctctgcagctctagtattggtaccttacttcattcttcaaaacaattgcaatgtgtggtaaaaataattccttgtgagaacagccgtacatttgtcaacggaaagctggtcacagaatccacagtgttgagatcaggggctcgtattattcttggaaacaatcacgtattcagatttaataatcctgaacaagctcgcgaggagcggattcgccagtcccgaggaaatcttttggaagacataaacggaaaaaacgaggcgaaaggtgaagagcctgtagactggtcatttgctgtgttggaactcttgcgagagcagggctgggatgtaaaagaaatgaacgaaagagttcttgagctagaagagcagatcaagaaagaaaaagatcaagcggatttgctactagaacaacaaagagtgagctatgaaacacgacttcaggaacttcaacggaagaatgattctctgcacgattcttcgcgtaaaaagaaaaaactcatgttgatctttccacaatcgaaaacagcacaaattcactttccttccaaggattcccgccgtgtttgtcacaggcgggcatcaacaactgatggcaattctaagatggagcttgcgtcagtgccgtctagtgaatcagtggacagcgacattgatgtggaaagctttgacagcgagagcccgctgaccgagcgtgagcttaacctggcagaagtggtggtggacaagtggaagtgttacctgtgcacgtcattcagggatgacttgttgagccatgcagtgctgttaaaagaagctaatgccatcagtgtggagttgaggaagaaggtggagtttcaattcactctgttgacagacacactctacactcccctcccatcgtttcttctgagtgacgtcagatacaaagacaatcctactgtacttgctgttgaagtgaaagacatgaaacatggcgcctcacattactggtctcttggcaaactacgggatcgactggaggatatgcgcttcatgtatgacaccgccgcggagtccaacgccaaaatctcctttgactctgttgaccctttctatgacgcactaccttggttcaggctcatcggcaggtcttttgtatacctgagtaacttggtgtatggtgttcccttggagcaagctgtgccgattgtcagtgaatcaggagacatacaaggaaatctgtccatcaatatccaacaatgcactgatgatcagacatgggatgtggatgagatgggaaggccctgtgtgttgtggttggattttcgagctgatgatcaggagcgaaagagtgaggtggaggaggcagaagaagcggctgaagcagacgaggtaaccgagcctccattctcaaaggggacacttcatgttggtaaaccttatgtgatcaacatcactgtactgcaggctcaagggattccagctcagtacacagacatcttctgccagataagatttctgtgtagtgaggaagatgaaggattttcaactgagcccgttgcaaataaacaaaatggcggcccattgggattctactttaatcaaaagtaccaggcccttgcaggtggaggtgtttggccactatcagcattgtccaactcagtccggtgtacagcttcaagggccattgttaaggaaggcaaaacggattctaaatcattaaaagactctccacctgccgtccccgtgccatatcaactcagtgatgacgaaggaactctgaaatttgatttgctggtctgggttgaggtctttgaaatgtcaccgtctggagactattttccctgcgttgtgaaacgtaaacaggatactccttctggtggggtttttcttctacatcagggaatccaaaggcgcctggttgtcactattatacacgagaactccatggatatcagaataagacgagttatggaccttgttgttggtcgagtccgcacaactctcgtccctccccctgcaggggagagttcgcctcacaccatctctttaaacgtactgtcacctcaagtccagtcccacccagatgagaacaaatctgtcttcaggtttgaggcggcctgggactcgtcgcttcataattccatcttgcttaacagagtgacaccgccaggagagcttgtgtttgttaccatttcagcgtatcttgagctggaaaactgttgccaaacgtcttgtctcacaaaggatatttctctgtgcgtgttcgggagggatgcaaaaacgtcctccaggtctgtttttagtttatttggctcttcaaagcgtcctgaaaatgacaagcttagtgatatatttgaacttgtttatcatcctgctgatgagcacggccagctgatgaaaacaaagaagagagtggttatggacacatcgagtatttacgtgagaggagaagaaaaccttggagagtggaaacctagagggatatccctcattgatgaacaccaggcgtatttagacaaactggagagagttcaggaggtgggtaaagctcgtcatatcctgtgccttggagacaagctcatgtcctcggaccgtcctgacaccgtgctggtagatccgggaattttctccgctggcagcgcgtattccagccgaagtagcctgggttctatttcattgtcgtcttcctttctgtcagttgcttcacttccggctgggaaaccgctgcgttttacaagagatgttgacccacaaaaagttaaagaaactttgctgaagaagtgtcttcgtctcttaacgtggaaaaaagacttcagcgaggtgaaagcattgagtcgagcttcatcgtcagagggcggtgcaagtgcgttgggagccgagcagaacgaacaagaagatgaatctaaagtggagtattatgtaccagaggtggtgctcgtcagaaagaacccagtgataaccaaacgaggctaccttcatatcatggatgactgcagctgcaagtggagcagatgttatgtgattgttagaaagccttacgtccttctttatcgccaagaaggtgacccggttgagcaatatttaatcaatctgaagtattccaaagtggagtgtccagagtattttgtgacgtttagtgttttctcaatccgcacaagacactgtagattcctggtacgaacaccaacagagaaagaggaggatacatatgattggctgtatgcgctcgaccctctgttagtaggcagcataaggtcaagaagagggagcttaaaacagggacacaaatga

Transcript

evm.model.Ap1.2595

ATGTCGTCCGTGAAGGTAGCTGTGCGAGTGAGGCCCTTCGCGAGCCGAGAAAACAATCGAGGCAGCAAATGTATAATTGGGATGCACGGAGCCACAACGACTATCCTGAACCCAAGAAACCTGAGTGAAAAGCCTAAGAGTTTTACTTTTGATTATTCTTATTGGTCTCATAATGAGAATGATCACCATTTTGCATCGCAGAAGAAAGTCTATGCAGATATTGGCAAAGAAATGTTGGCACATGCATTTGAAGGATACAACATCTGTATATTTGCATATGGCCAGACAGGGTCAGGAAAGTCCTACACAATGATGGGCAAACAAGAAGTTGACCAGAAAGGAATCATACCACAGCTCTGCGAAGAGCTGTTTCAAAAGATTGACAGTGAGAGCAGTGAGGAGATGACGTTATCTGCTGAGGTTAGCTATCTTGAAATCTACTGTGAGAGAGTGCGAGATTTACTGAGTCCAAGTGCCAAAAACAATTTGAGAGTGAGGGAACACCCAATGTTAGGACCATATGTAGAGGATCTGACTAAACTTGCTGTCACTTCATTTGCTGACATAAACGACCTTATTGATGAAGGCAACAAAGCCAGGACAGTAGCTGCCACAAACATGAATGAAACCAGCAGTAGATCTCATGCAATTTTTAGTATTGTGTTTACACAGCGAAGACATGACACCTTATCAGACCTTTCATCAGCTAAGGTAAGCAAGCTGAGCTTGGTGGACCTTGCCGGCAGTGAGAGGGCAGATGCAACAGGTGCTAAAGGGGAGAGACTCAAGGAAGGTGCAAACATCAACAAATCATTGACTACTCTGGGGAAGGTGATCTCCGCTTTAGCTGAACAGTCTTCTCATAAGAAGAAAAGGAGATCAGATTTCATACCATACAGAGATTCTGTCCTGACCTGGCTCCTAAAGGAAAATCTAGGTGGTAACTCAAAGACAGCCATGATTGCAGCTATAAGTCCAGCAGACATTAATTTTGAGGAAACTTTGAGTACATTAAGATATGCTGATCGTGCAAAACAGATTTTATGTAAAGCTATTGTCAATGAGGATCCTAATGCAAAGATTATTCGAGAATTAAAAGAAGAAGTATCAAAACTGAAAGATCTTCTTCTCAAGGAAGGCTACAATCCTGATGATCTGCAATCTGTTCTAAAACAAGGTTCCACCCACTTGCCCAGAAGATATAGCCAAGAGTTCCAGGATGGAACCTTAGAGAGGCTTAAGGTATCAGAGAAACTTATCGCTGAGCTCAATGAAACCTGGGAAGAGAAACTAAGAAAAACAGAAGCGATCAAGCAGGAGAGAGAGGCGATGCTAGCTGAAATGGGTGTAGCTATTGGTGTGGATGGCCATACAGTTGGACTATTTCAACCTAGAAGGAGACCTCATTTGGTGAATTTAAATGAAGATCCTTTGATGTCTGAATGTCTTCTTTACTATGTAAAGGATGGGATGACAAGGGTTGGCCAAGCCAGAGCAAAAAGTCATCAAGATATTCAGCTGAGTGGCGAGAATATTCTTGATGAGCATTGTCTCTTGGAACATATTCAAGGCAAGTGTACTCTTTTTGTTGTACAGCTTATATCTGTATCACATACGTCAGGGTATTACAATCTCTGCAGCTCTAGTATTGGTACCTTACTTCATTCTTCAAAACAATTGCAATGTGTGGTAAAAATAATTCCTTGTGAGAACAGCCGTACATTTGTCAACGGAAAGCTGGTCACAGAATCCACAGTGTTGAGATCAGGGGCTCGTATTATTCTTGGAAACAATCACGTATTCAGATTTAATAATCCTGAACAAGCTCGCGAGGAGCGGATTCGCCAGTCCCGAGGAAATCTTTTGGAAGACATAAACGGAAAAAACGAGGCGAAAGGTGAAGAGCCTGTAGACTGGTCATTTGCTGTGTTGGAACTCTTGCGAGAGCAGGGCTGGGATGTAAAAGAAATGAACGAAAGAGTTCTTGAGCTAGAAGAGCAGATCAAGAAAGAAAAAGATCAAGCGGATTTGCTACTAGAACAACAAAGAGTGAGCTATGAAACACGACTTCAGGAACTTCAACGGAAGAATGATTCTCTGCACGATTCTTCGCGTAAAAAGAAAAAACTCATGTTGATCTTTCCACAATCGAAAACAGCACAAATTCACTTTCCTTCCAAGGATTCCCGCCGTGTTTGTCACAGGCGGGCATCAACAACTGATGGCAATTCTAAGATGGAGCTTGCGTCAGTGCCGTCTAGTGAATCAGTGGACAGCGACATTGATGTGGAAAGCTTTGACAGCGAGAGCCCGCTGACCGAGCGTGAGCTTAACCTGGCAGAAGTGGTGGTGGACAAGTGGAAGTGTTACCTGTGCACGTCATTCAGGGATGACTTGTTGAGCCATGCAGTGCTGTTAAAAGAAGCTAATGCCATCAGTGTGGAGTTGAGGAAGAAGGTGGAGTTTCAATTCACTCTGTTGACAGACACACTCTACACTCCCCTCCCATCGTTTCTTCTGAGTGACGTCAGATACAAAGACAATCCTACTGTACTTGCTGTTGAAGTGAAAGACATGAAACATGGCGCCTCACATTACTGGTCTCTTGGCAAACTACGGGATCGACTGGAGGATATGCGCTTCATGTATGACACCGCCGCGGAGTCCAACGCCAAAATCTCCTTTGACTCTGTTGACCCTTTCTATGACGCACTACCTTGGTTCAGGCTCATCGGCAGGTCTTTTGTATACCTGAGTAACTTGGTGTATGGTGTTCCCTTGGAGCAAGCTGTGCCGATTGTCAGTGAATCAGGAGACATACAAGGAAATCTGTCCATCAATATCCAACAATGCACTGATGATCAGACATGGGATGTGGATGAGATGGGAAGGCCCTGTGTGTTGTGGTTGGATTTTCGAGCTGATGATCAGGAGCGAAAGAGTGAGGTGGAGGAGGCAGAAGAAGCGGCTGAAGCAGACGAGGTAACCGAGCCTCCATTCTCAAAGGGGACACTTCATGTTGGTAAACCTTATGTGATCAACATCACTGTACTGCAGGCTCAAGGGATTCCAGCTCAGTACACAGACATCTTCTGCCAGATAAGATTTCTGTGTAGTGAGGAAGATGAAGGATTTTCAACTGAGCCCGTTGCAAATAAACAAAATGGCGGCCCATTGGGATTCTACTTTAATCAAAAGTACCAGGCCCTTGCAGGTGGAGGTGTTTGGCCACTATCAGCATTGTCCAACTCAGTCCGGTGTACAGCTTCAAGGGCCATTGTTAAGGAAGGCAAAACGGATTCTAAATCATTAAAAGACTCTCCACCTGCCGTCCCCGTGCCATATCAACTCAGTGATGACGAAGGAACTCTGAAATTTGATTTGCTGGTCTGGGTTGAGGTCTTTGAAATGTCACCGTCTGGAGACTATTTTCCCTGCGTTGTGAAACGTAAACAGGATACTCCTTCTGGTGGGGTTTTTCTTCTACATCAGGGAATCCAAAGGCGCCTGGTTGTCACTATTATACACGAGAACTCCATGGATATCAGAATAAGACGAGTTATGGACCTTGTTGTTGGTCGAGTCCGCACAACTCTCGTCCCTCCCCCTGCAGGGGAGAGTTCGCCTCACACCATCTCTTTAAACGTACTGTCACCTCAAGTCCAGTCCCACCCAGATGAGAACAAATCTGTCTTCAGGTTTGAGGCGGCCTGGGACTCGTCGCTTCATAATTCCATCTTGCTTAACAGAGTGACACCGCCAGGAGAGCTTGTGTTTGTTACCATTTCAGCGTATCTTGAGCTGGAAAACTGTTGCCAAACGTCTTGTCTCACAAAGGATATTTCTCTGTGCGTGTTCGGGAGGGATGCAAAAACGTCCTCCAGGTCTGTTTTTAGTTTATTTGGCTCTTCAAAGCGTCCTGAAAATGACAAGCTTAGTGATATATTTGAACTTGTTTATCATCCTGCTGATGAGCACGGCCAGCTGATGAAAACAAAGAAGAGAGTGGTTATGGACACATCGAGTATTTACGTGAGAGGAGAAGAAAACCTTGGAGAGTGGAAACCTAGAGGGATATCCCTCATTGATGAACACCAGGCGTATTTAGACAAACTGGAGAGAGTTCAGGAGGTGGGTAAAGCTCGTCATATCCTGTGCCTTGGAGACAAGCTCATGTCCTCGGACCGTCCTGACACCGTGCTGGTAGATCCGGGAATTTTCTCCGCTGGCAGCGCGTATTCCAGCCGAAGTAGCCTGGGTTCTATTTCATTGTCGTCTTCCTTTCTGTCAGTTGCTTCACTTCCGGCTGGGAAACCGCTGCGTTTTACAAGAGATGTTGACCCACAAAAAGTTAAAGAAACTTTGCTGAAGAAGTGTCTTCGTCTCTTAACGTGGAAAAAAGACTTCAGCGAGGTGAAAGCATTGAGTCGAGCTTCATCGTCAGAGGGCGGTGCAAGTGCGTTGGGAGCCGAGCAGAACGAACAAGAAGATGAATCTAAAGTGGAGTATTATGTACCAGAGGTGGTGCTCGTCAGAAAGAACCCAGTGATAACCAAACGAGGCTACCTTCATATCATGGATGACTGCAGCTGCAAGTGGAGCAGATGTTATGTGATTGTTAGAAAGCCTTACGTCCTTCTTTATCGCCAAGAAGGTGACCCGGTTGAGCAATATTTAATCAATCTGAAGTATTCCAAAGTGGAGTGTCCAGAGTATTTTGTGACGTTTAGTGTTTTCTCAATCCGCACAAGACACTGTAGATTCCTGGTACGAACACCAACAGAGAAAGAGGAGGATACATATGATTGGCTGTATGCGCTCGACCCTCTGTTAGTAGGCAGCATAAGGTCAAGAAGAGGGAGCTTAAAACAGGGACACAAATGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q28WQ1	Kinesin-like protein unc-104 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=unc-104 PE=3 SV=1
A1ZAJ2	Kinesin-like protein unc-104 OS=Drosophila melanogaster OX=7227 GN=unc-104 PE=1 SV=1
Q7PHR1	Kinesin-like protein unc-104 OS=Anopheles gambiae OX=7165 GN=unc-104 PE=3 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004492 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12423 all species →	KIF1B	Kinesin protein 1B	Family	Interproscan
PF16183 all species →	Kinesin_assoc	Kinesin-associated	Family	Interproscan
PF00225 all species →	Kinesin	Kinesin motor domain	Domain	Interproscan
PF12473 all species →	DUF3694	Kinesin protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752 all species →	Domain	Kinesin motor domain	Interproscan
IPR022140 all species →	Domain	Kinesin-like KIF1-type	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR019821 all species →	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR032405 all species →	Domain	Kinesin-associated	Interproscan
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR008984 all species →	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR022164 all species →	Domain	Kinesin-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47117 all species →	STAR-RELATED LIPID TRANSFER PROTEIN 9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003777 all species →	Molecular Function	microtubule motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap1.2595.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.