Genomic Location: Ap1:26976511...27005988
NR annotation: XP_020626769.1, conserved oligomeric Golgi complex subunit 7-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap1.2645 |
| Transcript |
| evm.model.Ap1.2645 |
| Protein |
| evm.model.Ap1.2645 |
| UniProt accession | Description |
|---|---|
| Q3UM29 | Conserved oligomeric Golgi complex subunit 7 OS=Mus musculus OX=10090 GN=Cog7 PE=1 SV=1 |
| Q3T1G7 | Conserved oligomeric Golgi complex subunit 7 OS=Rattus norvegicus OX=10116 GN=Cog7 PE=2 SV=1 |
| P83436 | Conserved oligomeric Golgi complex subunit 7 OS=Homo sapiens OX=9606 GN=COG7 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004750 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10191 all species → | COG7 | Golgi complex component 7 (COG7) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019335 all species → | Family | Conserved oligomeric Golgi complex subunit 7 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21443 all species → | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006886 all species → | Biological Process | intracellular protein transport | Interproscan |
| GO:0006890 all species → | Biological Process | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | Interproscan |
| GO:0007030 all species → | Biological Process | Golgi organization | Interproscan |
| GO:0017119 all species → | Cellular Component | Golgi transport complex | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K20294 | COG7; conserved oligomeric Golgi complex subunit 7 | - | Membrane trafficking | ko04131 | deepkoala |
Transcript abundance of evm.model.Ap1.2645 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
