Detailed information of evm.model.Ap1.2651 in Astrangia poculata

Genomic Location: Ap1:27063602...27095402
NR annotation: XP_020626973.1, voltage-dependent R-type calcium channel subunit alpha-1E-like isoform X2 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C9D7C2Voltage-dependent calcium channel type A subunit alpha-1 OS=Apis mellifera OX=7460 GN=CAC PE=2 SV=1
P91645Voltage-dependent calcium channel type A subunit alpha-1 OS=Drosophila melanogaster OX=7227 GN=cac PE=1 SV=3
Q01815Voltage-dependent L-type calcium channel subunit alpha-1C OS=Mus musculus OX=10090 GN=Cacna1c PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000399 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08763
all species →		Ca_chan_IQVoltage gated calcium channel IQ domainDomainInterproscan
PF00520
all species →		Ion_transIon transport proteinFamilyInterproscan
PF16905
all species →		GPHHVoltage-dependent L-type calcium channel, IQ-associatedFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027359
all species →		Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR014873
all species →		DomainVoltage-dependent calcium channel, alpha-1 subunit, IQ domainInterproscan
IPR005821
all species →		DomainIon transport domainInterproscan
IPR031649
all species →		DomainVoltage-dependent L-type calcium channel, IQ-associated domainInterproscan
IPR002077
all species →		FamilyVoltage-dependent calcium channel, alpha-1 subunitInterproscan
IPR050599
all species →		FamilyVoltage-dependent calcium channel alpha-1 subunitInterproscan
IPR002048
all species →		DomainEF-hand domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45628
all species →		VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005216
all species →		Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811
all species →		Biological Processmonoatomic ion transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan
GO:0005245
all species →		Molecular Functionvoltage-gated calcium channel activityInterproscan
GO:0005891
all species →		Cellular Componentvoltage-gated calcium channel complexInterproscan
GO:0070588
all species →		Biological Processcalcium ion transmembrane transportInterproscan
GO:0008331
all species →		Molecular Functionhigh voltage-gated calcium channel activityInterproscan
GO:0098703
all species →		Biological Processcalcium ion import across plasma membraneInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.2651.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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