Gene detail

Detailed information of evm.model.Ap1.2813 in Astrangia poculata

Genomic Location: Ap1:28789470...28798820
NR annotation: XP_020630805.1, adenylate kinase isoenzyme 5-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

evm.model.Ap1.2813

AAAAACAAGAGAAGAAAAAAAAATTTCCCAATGAAAGAAAACGGGACAGTTTTGGGGTTCTCGGCAAAGGATATATTTGTTTTAGGTGGCCAGGTTCGGTAAAGAAACCCCAAAGTGCCGTATGTGAAGTTTGGCTACACTCATTTATCAACTGGCGATCGATTGCGAGCAGAGTTGAGAGTGGCGGACAGGACAAAACTCGCTCAAAATGGAAGAAGGCAATCTCGTTCCTCAGGAGATTGTGATTCAACTTCTGAAGGACGCCATGTTGCGATATCCAGACTCACCCGGATTCCTTATTGACGGATTTCCTCGTGAAACGTCTCAAGGTGTACAGTTTGAAGAAGAGATTGCCGAGTGTCACTTCATCTTGTTCTTTGAATGCAGTGAAGAAGTTATGGAAGAGAGGCTCATCAAACGAGGAGAGACAAGCGGTCGAGTGGACGATAACGCGGAAACCATCAAGAAACGATTCAGAACATTTGTGGAAAAAACTGTGCCAGTCCTTGAGTGTTATGAAGAGAAAAACAAAGTTAAAAGAGTGGACGCCACACGCTCTGTGGATGAAGTCTTTGTGGACGTGTGCACAATCTTTGGAGACCTTCCAAAACTTGAAAAGAAGAGAAGAAAGAAAGTTAAAAAGACTGAGAGTGATTCAGAATATGACGAACTTGCTGAAGCCGTTGACGACTTGTCCCGAGTCGTGGACGGAAAACCGATCAAATTACGAAGAAGGAAGAAAAAGAAGAAGGAAGAAGACGAAGAGCCGAAAACTCCAATTTACGAGCAGCCGATTGTTGCCGAAGAGTTTGTTCCTCTCATGGACGACACCATCGCGAAAACCGATGGAAAAGGGCTGTTAAATGTTAGAGTTATATTCGTCATTGGTGGCCCTGGATCCGGCAAGGGAACGCAATGCCAACGTATCGTGGATACATTTGGGTACACTCACTTGTCGACTGGAGATTTACTGAGAGAAGAAGTCCAGTCTGGTTCACCAAGAAGCAAAGAGTTGGTGCAAATCATGGAGAAAGGAGAACTTATTCCTACGAGAATTATTTTGGAATTATTGCGAGTCGCTATGGTGCACATTCCAAACACTAAAGGGTTTATTGTCGATGGCTTTCCCAGAGAAATGGAACAGGGAAAAGAATTTGAAAATGAGATCGCGAGTTGTGAGTTTGTGCTGTACTTTGAATGTTCCCCGGAATCGATGAAGCAACGGCTTTTGGCGCGAGGAGAAACGAGTGGCCGCGTGGATGACAACGAAGAAACGATCGCTAAACGATTGGAAACGTTTGAAAACCAAACCAAGCCTGTTATTGAATACTACGAGTCACAAAATAAAGTGAAAAAGATTTTAGCCGAAGGTTCGCCCGATGAAGTTTTCGCTCAAGTTAGTAATATCTTTGAACATCTTCCGAACCGGAAGTCAACGTCACTTCATGACTATGACGTCACTTTTATAACAGGTCCACCTGGAGTGGGGAAGGCAGACTTGGGTCGAACGCTAGCAGAGGCGACTGGAAGAACGCATTTATCTGTTGGTCAAATGTTACGAGAAGAAGCGGAAAAGGACACAGAGGAGGCCCAGGAGATCAATCAAGCCATAAAGATGGGAGTATTAGTAGCTACGGACATTGTTCTGGCGTTGCTGACAAGAATGCTAGAAAAAGAAGAAAAGAACTTGAATGGATACTGCATAGATGGCTACCCACGAACAGAGGAGCAGCTTGATCAGTTTAAAAAAAAGGTGTCTGATTACAACAGAATCATCGCAATAGAAAGCAACGACGAAGAAACAGACCGAGTGTTAAAGGAAAGAGCGGGAACGTCAGAGCGAGAAGACGATAGCGAGGAAATATCAAAAACTAAACTGGAGGTTTACAACGAAAATACACGATCCATGAACAGTTTGGAAGACTCGAACAAAACCGTTAAGGTTTCTGCTGCCTTACCAAGAGAGGAAGTGGTAGAAGACATCAGATTGAAAATAATGGCAGTAACGGAATTTTCATCTTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y6K8	Adenylate kinase isoenzyme 5 OS=Homo sapiens OX=9606 GN=AK5 PE=1 SV=2
A4IFD0	Adenylate kinase isoenzyme 5 OS=Bos taurus OX=9913 GN=Ak5 PE=2 SV=1
Q920P5	Adenylate kinase isoenzyme 5 OS=Mus musculus OX=10090 GN=Ak5 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006284 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00406 all species →	ADK	Adenylate kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006266 all species →	Family	UMP-CMP kinase	Interproscan
IPR000850 all species →	Family	Adenylate kinase/UMP-CMP kinase	Interproscan
IPR033690 all species →	Conserved_site	Adenylate kinase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23359 all species →	NUCLEOTIDE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004127 all species →	Molecular Function	(d)CMP kinase activity	Interproscan
GO:0006207 all species →	Biological Process	'de novo' pyrimidine nucleobase biosynthetic process	Interproscan
GO:0006221 all species →	Biological Process	pyrimidine nucleotide biosynthetic process	Interproscan
GO:0009041 all species →	Molecular Function	UMP/dUMP kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006139 all species →	Biological Process	nucleobase-containing compound metabolic process	Interproscan
GO:0019205 all species →	Molecular Function	nucleobase-containing compound kinase activity	Interproscan
GO:0004017 all species →	Molecular Function	adenylate kinase activity	Interproscan
GO:0004550 all species →	Molecular Function	nucleoside diphosphate kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006165 all species →	Biological Process	obsolete nucleoside diphosphate phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00939	adk, AK; adenylate kinase	EC:2.7.4.3	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.