Genomic Location: Ap1:28828985...28844669
NR annotation: KAJ7339371.1, NADPH-dependent diflavin oxidoreductase 1 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap1.2817 |
| Transcript |
| evm.model.Ap1.2817 |
| Protein |
| evm.model.Ap1.2817 |
| UniProt accession | Description |
|---|---|
| Q6NRG5 | NADPH-dependent diflavin oxidoreductase 1 OS=Xenopus laevis OX=8355 GN=ndor1 PE=2 SV=1 |
| Q6PFP6 | NADPH-dependent diflavin oxidoreductase 1 OS=Danio rerio OX=7955 GN=ndor1 PE=2 SV=1 |
| Q9UHB4 | NADPH-dependent diflavin oxidoreductase 1 OS=Homo sapiens OX=9606 GN=NDOR1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001660 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00175 all species → | NAD_binding_1 | Oxidoreductase NAD-binding domain | Domain | Interproscan |
| PF00258 all species → | Flavodoxin_1 | Flavodoxin | Domain | Interproscan |
| PF00667 all species → | FAD_binding_1 | FAD binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001433 all species → | Domain | Oxidoreductase FAD/NAD(P)-binding | Interproscan |
| IPR008254 all species → | Domain | Flavodoxin/nitric oxide synthase | Interproscan |
| IPR023173 all species → | Homologous_superfamily | NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily | Interproscan |
| IPR028879 all species → | Family | NADPH-dependent diflavin oxidoreductase 1 | Interproscan |
| IPR003097 all species → | Domain | Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding | Interproscan |
| IPR029039 all species → | Homologous_superfamily | Flavoprotein-like superfamily | Interproscan |
| IPR017927 all species → | Domain | FAD-binding domain, ferredoxin reductase-type | Interproscan |
| IPR001709 all species → | Domain | Flavoprotein pyridine nucleotide cytochrome reductase | Interproscan |
| IPR017938 all species → | Homologous_superfamily | Riboflavin synthase-like beta-barrel | Interproscan |
| IPR001094 all species → | Domain | Flavodoxin-like | Interproscan |
| IPR039261 all species → | Homologous_superfamily | Ferredoxin-NADP reductase (FNR), nucleotide-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19384 all species → | NITRIC OXIDE SYNTHASE-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0016491 all species → | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0010181 all species → | Molecular Function | FMN binding | Interproscan |
| GO:0003958 all species → | Molecular Function | NADPH-hemoprotein reductase activity | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0050660 all species → | Molecular Function | flavin adenine dinucleotide binding | Interproscan |
evm.model.Ap1.2817.Transcript abundance of evm.model.Ap1.2817 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
