Detailed information of evm.model.Ap1.2873 in Astrangia poculata

Genomic Location: Ap1:29460296...29474269
NR annotation: KAJ7339366.1, hypothetical protein OS493_005760 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0A0R4I9Y1E3 ubiquitin-protein ligase rnf213-beta OS=Danio rerio OX=7955 GN=rnf213b PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000236 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap1.2873. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR031248
all species →		FamilyE3 ubiquitin-protein ligase RNF213Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22605
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.2873.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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