Detailed information of evm.model.Ap1.2954 in Astrangia poculata

Genomic Location: Ap1:30339322...30345845
NR annotation: CAH3178861.1, unnamed protein product [Porites lobata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9ULJ7Ankyrin repeat domain-containing protein 50 OS=Homo sapiens OX=9606 GN=ANKRD50 PE=1 SV=4
Q0VGY8Protein TANC1 OS=Mus musculus OX=10090 GN=Tanc1 PE=1 SV=2
Q6F6B3Protein TANC1 OS=Rattus norvegicus OX=10116 GN=Tanc1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000627 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13637
all species →
Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF15112
all species →
DUF4559Domain of unknown function (DUF4559)FamilyInterproscan
PF12796
all species →
Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF00023
all species →
AnkAnkyrin repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110
all species →
RepeatAnkyrin repeatInterproscan
IPR036770
all species →
Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR027897
all species →
FamilyProtein of unknown function DUF4559Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24178
all species →
MOLTING PROTEIN MLT-4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K21440ANKRD50; ankyrin repeat domain-containing protein 50-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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