Detailed information of evm.model.Ap1.2986 in Astrangia poculata

Genomic Location: Ap1:30676977...30681705
NR annotation: XP_020603984.1, transcriptional adapter 1-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96BN2Transcriptional adapter 1 OS=Homo sapiens OX=9606 GN=TADA1 PE=1 SV=1
Q5RDB9Transcriptional adapter 1 OS=Pongo abelii OX=9601 GN=TADA1 PE=2 SV=1
A6QR06Transcriptional adapter 1 OS=Bos taurus OX=9913 GN=TADA1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005520 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12767
all species →		SAGA-Tad1Transcriptional regulator of RNA polII, SAGA, subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024738
all species →		FamilyTranscriptional coactivator Hfi1/Transcriptional adapter 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21277
all species →		TRANSCRIPTIONAL ADAPTER 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0070461
all species →		Cellular ComponentSAGA-type complexInterproscan
GO:0000124
all species →		Cellular ComponentSAGA complexInterproscan
GO:0003713
all species →		Molecular Functiontranscription coactivator activityInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.2986.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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