Detailed information of evm.model.Ap1.3025 in Astrangia poculata

Genomic Location: Ap1:31043216...31048122
NR annotation: CAH3037589.1, unnamed protein product [Pocillopora meandrina]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9W6G7DNA polymerase subunit gamma-2, mitochondrial OS=Xenopus laevis OX=8355 GN=polg2 PE=1 SV=1
Q9QZM2DNA polymerase subunit gamma-2 OS=Mus musculus OX=10090 GN=Polg2 PE=1 SV=2
Q9UHN1DNA polymerase subunit gamma-2 OS=Homo sapiens OX=9606 GN=POLG2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008199 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03129
all species →		HGTP_anticodonAnticodon binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004154
all species →		DomainAnticodon-bindingInterproscan
IPR045864
all species →		Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR036621
all species →		Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR027031
all species →		FamilyGlycyl-tRNA synthetase/DNA polymerase subunit gamma-2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10745
all species →		GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006264
all species →		Biological Processmitochondrial DNA replicationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02333POLG2; DNA polymerase gamma 2-Mitochondrial biogenesisko03029deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP