Detailed information of evm.model.Ap1.3168 in Astrangia poculata

Genomic Location: Ap1:32347793...32348923
NR annotation: CAH3130463.1, unnamed protein product, partial [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000044 (this species only)
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628
all species →		PHDPHD-fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR019786
all species →		Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR001965
all species →		DomainZinc finger, PHD-typeInterproscan
IPR019787
all species →		DomainZinc finger, PHD-fingerInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34718
all species →		PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap1.3168. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.3168.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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