Detailed information of evm.model.Ap1.3195 in Astrangia poculata

Genomic Location: Ap1:32521466...32526746
NR annotation: KAJ7370115.1, hypothetical protein OS493_034044 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P15870Histone H1-delta OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
H3ZPL1Aromatic-amino-acid aminotransferase 1 OS=Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 / NS-C) OX=523849 GN=OCC_04335 PE=1 SV=1
P02258Histone H5 OS=Anser anser anser OX=8844 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000413 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00538
all species →		Linker_histonelinker histone H1 and H5 familyDomainInterproscan
PF00155
all species →		Aminotran_1_2Aminotransferase class I and IIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005818
all species →		DomainLinker histone H1/H5, domain H15Interproscan
IPR005819
all species →		FamilyLinker histone H1/H5Interproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR015422
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015424
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR015421
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR004839
all species →		DomainAminotransferase, class I/classIIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42858
all species →		AMINOTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0047536
all species →		Molecular Function2-aminoadipate transaminase activityInterproscan
GO:0000786
all species →		Cellular ComponentnucleosomeInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006334
all species →		Biological Processnucleosome assemblyInterproscan
GO:0030527
all species →		Molecular Functionstructural constituent of chromatinInterproscan
GO:0009058
all species →		Biological Processbiosynthetic processInterproscan
GO:0030170
all species →		Molecular Functionpyridoxal phosphate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.3195.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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