Detailed information of evm.model.Ap1.3196 in Astrangia poculata

Genomic Location: Ap1:32529655...32530065
NR annotation: NP_001005464.1, histone H3.2 [Homo sapiens]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P84227Histone H3.2 OS=Bos taurus OX=9913 PE=1 SV=2
P84230Histone H3.2 OS=Cairina moschata OX=8855 PE=2 SV=2
P84229Histone H3.2 OS=Gallus gallus OX=9031 GN=H3-I PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000353 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00125
all species →		HistoneCore histone H2A/H2B/H3/H4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009072
all species →		Homologous_superfamilyHistone-foldInterproscan
IPR000164
all species →		FamilyHistone H3/CENP-AInterproscan
IPR007125
all species →		DomainHistone H2A/H2B/H3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11426
all species →		HISTONE H3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046982
all species →		Molecular Functionprotein heterodimerization activityInterproscan
GO:0000786
all species →		Cellular ComponentnucleosomeInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0030527
all species →		Molecular Functionstructural constituent of chromatinInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11253H3; histone H3-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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