Detailed information of evm.model.Ap1.3368 in Astrangia poculata

Genomic Location: Ap1:34491311...34499691
NR annotation: XP_020612407.1, FAD-linked oxidoreductase DDB_G0289697-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P08159(R)-6-hydroxynicotine oxidase OS=Paenarthrobacter nicotinovorans OX=29320 GN=6-hdno PE=1 SV=2
Q0CSA1FAD-linked oxidoreductase tazG OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=tazG PE=2 SV=1
A0A017SGC7FAD-linked oxidoreductase fogF OS=Aspergillus ruber (strain CBS 135680) OX=1388766 GN=fogF PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002281 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01565
all species →		FAD_binding_4FAD binding domain DomainInterproscan
PF08031
all species →		BBEBerberine and berberine like DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016167
all species →		Homologous_superfamilyFAD-binding, type PCMH, subdomain 1Interproscan
IPR016169
all species →		Homologous_superfamilyFAD-binding, type PCMH, subdomain 2Interproscan
IPR016166
all species →		DomainFAD-binding domain, PCMH-typeInterproscan
IPR050416
all species →		FamilyFAD-linked Oxidoreductases in Biosynthetic PathwaysInterproscan
IPR006094
all species →		DomainFAD linked oxidase, N-terminalInterproscan
IPR012951
all species →		DomainBerberine/berberine-likeInterproscan
IPR036318
all species →		Homologous_superfamilyFAD-binding, type PCMH-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42973
all species →		BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G17690)-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0071949
all species →		Molecular FunctionFAD bindingInterproscan
GO:0050660
all species →		Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.3368.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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