Gene detail

Detailed information of evm.model.Ap1.3434 in Astrangia poculata

Genomic Location: Ap1:35350354...35354343
NR annotation: XP_020630207.1, peroxiredoxin-6-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5ZJF4	Peroxiredoxin-6 OS=Gallus gallus OX=9031 GN=PRDX6 PE=2 SV=3
O77834	Peroxiredoxin-6 OS=Bos taurus OX=9913 GN=PRDX6 PE=1 SV=3
P30041	Peroxiredoxin-6 OS=Homo sapiens OX=9606 GN=PRDX6 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004515 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00578 all species →	AhpC-TSA	AhpC/TSA family	Domain	Interproscan
PF10417 all species →	1-cysPrx_C	C-terminal domain of 1-Cys peroxiredoxin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024706 all species →	Family	Peroxiredoxin, AhpC-type	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR000866 all species →	Domain	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	Interproscan
IPR019479 all species →	Domain	Peroxiredoxin, C-terminal	Interproscan
IPR013766 all species →	Domain	Thioredoxin domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43503 all species →	MCG48959-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016209 all species →	Molecular Function	antioxidant activity	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0051920 all species →	Molecular Function	peroxiredoxin activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0045454 all species →	Biological Process	cell redox homeostasis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11188	PRDX6; peroxiredoxin 6	EC:1.11.1.7 EC:1.11.1.27 EC:3.1.1.-	Phenylpropanoid biosynthesis	ko00940	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.