Gene detail

Detailed information of evm.model.Ap1.3445 in Astrangia poculata

Genomic Location: Ap1:35516175...35526616
NR annotation: KAJ7360304.1, hypothetical protein OS493_016934 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P28304	Quinone oxidoreductase 1 OS=Escherichia coli (strain K12) OX=83333 GN=qorA PE=1 SV=1
P40783	Quinone oxidoreductase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=qor PE=3 SV=2
P43903	Quinone oxidoreductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=qor PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002297 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08240 all species →	ADH_N	Alcohol dehydrogenase GroES-like domain	Domain	Interproscan
PF00107 all species →	ADH_zinc_N	Zinc-binding dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013154 all species →	Domain	Alcohol dehydrogenase-like, N-terminal	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR013149 all species →	Domain	Alcohol dehydrogenase-like, C-terminal	Interproscan
IPR011032 all species →	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR002364 all species →	Conserved_site	Quinone oxidoreductase/zeta-crystallin, conserved site	Interproscan
IPR047618 all species →	Family	Quinone oxidoreductase-like	Interproscan
IPR020843 all species →	Domain	Polyketide synthase, enoylreductase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48106 all species →	QUINONE OXIDOREDUCTASE PIG3-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0003960 all species →	Molecular Function	NADPH:quinone reductase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0016651 all species →	Molecular Function	oxidoreductase activity, acting on NAD(P)H	Interproscan
GO:0017091 all species →	Molecular Function	mRNA 3'-UTR AU-rich region binding	Interproscan
GO:0070402 all species →	Molecular Function	NADPH binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00344	qor, CRYZ; NADPH:quinone reductase	EC:1.6.5.5	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.