Detailed information of evm.model.Ap1.3644.1.5f15e443 in Astrangia poculata

Genomic Location: Ap1:37641717...37673325
NR annotation: KAJ7370147.1, A disintegrin and metalloproteinase with thrombospondin motif [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q69Z28A disintegrin and metalloproteinase with thrombospondin motifs 16 OS=Mus musculus OX=10090 GN=Adamts16 PE=2 SV=2
Q8TE57A disintegrin and metalloproteinase with thrombospondin motifs 16 OS=Homo sapiens OX=9606 GN=ADAMTS16 PE=1 SV=3
Q8TE60A disintegrin and metalloproteinase with thrombospondin motifs 18 OS=Homo sapiens OX=9606 GN=ADAMTS18 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000928 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01562
all species →
Pep_M12B_propepReprolysin family propeptideFamilyInterproscan
PF01421
all species →
ReprolysinReprolysin (M12B) family zinc metalloprotease DomainInterproscan
PF19030
all species →
TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan
PF00090
all species →
TSP_1Thrombospondin type 1 domainDomainInterproscan
PF19236
all species →
ADAMTS_CR_3ADAMTS cysteine-rich domainDomainInterproscan
PF17771
all species →
ADAMTS_CR_2ADAMTS cysteine-rich domain 2DomainInterproscan
PF00431
all species →
CUBCUB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383
all species →
Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000859
all species →
DomainCUB domainInterproscan
IPR050439
all species →
FamilyADAMTS and ADAMTS-likeInterproscan
IPR002870
all species →
DomainPeptidase M12B, propeptideInterproscan
IPR001590
all species →
DomainPeptidase M12B, ADAM/reprolysinInterproscan
IPR000884
all species →
RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR013273
all species →
FamilyADAMTS/ADAMTS-likeInterproscan
IPR035914
all species →
Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR006586
all species →
DomainADAM, cysteine-rich domainInterproscan
IPR045371
all species →
DomainADAMTS/ADAMTS-like, cysteine-rich domain 3Interproscan
IPR041645
all species →
DomainADAMTS, cysteine-rich domain 2Interproscan
IPR024079
all species →
Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13723
all species →
ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004222
all species →
Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508
all species →
Biological ProcessproteolysisInterproscan
GO:0030198
all species →
Biological Processextracellular matrix organizationInterproscan
GO:0031012
all species →
Cellular Componentextracellular matrixInterproscan
GO:0008237
all species →
Molecular Functionmetallopeptidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.3644.1.5f15e443.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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