Detailed information of evm.model.Ap1.369 in Astrangia poculata

Genomic Location: Ap1:3295844...3305193
NR annotation: XP_020620014.1, sodium/potassium/calcium exchanger 2-like isoform X1 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UI40Sodium/potassium/calcium exchanger 2 OS=Homo sapiens OX=9606 GN=SLC24A2 PE=1 SV=1
O54701Sodium/potassium/calcium exchanger 2 OS=Rattus norvegicus OX=10116 GN=Slc24a2 PE=1 SV=1
Q8BUN9Sodium/potassium/calcium exchanger 2 OS=Mus musculus OX=10090 GN=Slc24a2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006556 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01699
all species →		Na_Ca_exSodium/calcium exchanger proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004481
all species →		FamilySodium/potassium/calcium exchangerInterproscan
IPR044880
all species →		Homologous_superfamilyNCX, central ion-binding domain superfamilyInterproscan
IPR004837
all species →		DomainSodium/calcium exchanger membrane regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10846
all species →		SODIUM/POTASSIUM/CALCIUM EXCHANGERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005262
all species →		Molecular Functioncalcium channel activityInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0006874
all species →		Biological Processintracellular calcium ion homeostasisInterproscan
GO:0008273
all species →		Molecular Functioncalcium, potassium:sodium antiporter activityInterproscan
GO:0070588
all species →		Biological Processcalcium ion transmembrane transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K13750SLC24A2, NCKX2; solute carrier family 24 (sodium/potassium/calcium exchanger), member 2-Transportersko02000deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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