Detailed information of evm.model.Ap1.3705 in Astrangia poculata

Genomic Location: Ap1:38201813...38202844
NR annotation: KAJ7383461.1, hypothetical protein OS493_027622 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002700 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01753
all species →		zf-MYNDMYND fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038825
all species →		FamilyApical junction componentInterproscan
IPR002893
all species →		DomainZinc finger, MYND-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21517
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0043296
all species →		Cellular Componentapical junction complexInterproscan
GO:0045216
all species →		Biological Processcell-cell junction organizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K04506SIAH1; E3 ubiquitin-protein ligase SIAH1EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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