Detailed information of evm.model.Ap1.3731 in Astrangia poculata

Genomic Location: Ap1:38530272...38554799
NR annotation: KAJ7383486.1, hypothetical protein OS493_027650 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q80U93Nuclear pore complex protein Nup214 OS=Mus musculus OX=10090 GN=Nup214 PE=1 SV=2
P35658Nuclear pore complex protein Nup214 OS=Homo sapiens OX=9606 GN=NUP214 PE=1 SV=2
Q9W1X4Nuclear pore complex protein Nup214 OS=Drosophila melanogaster OX=7227 GN=Nup214 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002726 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap1.3731. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR026054
all species →
FamilyNuclear pore complex proteinInterproscan
IPR015943
all species →
Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23193
all species →
NUCLEAR PORE COMPLEX PROTEIN NUPInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005643
all species →
Cellular Componentnuclear poreInterproscan
GO:0006405
all species →
Biological ProcessRNA export from nucleusInterproscan
GO:0006606
all species →
Biological Processprotein import into nucleusInterproscan
GO:0008139
all species →
Molecular Functionnuclear localization sequence bindingInterproscan
GO:0017056
all species →
Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14317NUP214, CAN; nuclear pore complex protein Nup214-Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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