Detailed information of evm.model.Ap1.3742 in Astrangia poculata

Genomic Location: Ap1:38705314...38710006
NR annotation: XP_015755194.1, PREDICTED: allograft inflammatory factor 1-like [Acropora digitifera]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9EQX4Allograft inflammatory factor 1-like OS=Mus musculus OX=10090 GN=Aif1l PE=1 SV=1
P55008Allograft inflammatory factor 1 OS=Homo sapiens OX=9606 GN=AIF1 PE=1 SV=1
Q9BQI0Allograft inflammatory factor 1-like OS=Homo sapiens OX=9606 GN=AIF1L PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007616 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21008
all species →		AIF-1Allograft inflammatory factor 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR042433
all species →		FamilyAllograft inflammatory factor 1Interproscan
IPR049025
all species →		DomainAllograft inflammatory factor 1-like, EF-hand domain pairInterproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10356
all species →		ALLOGRAFT INFLAMMATORY FACTOR-1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005884
all species →		Cellular Componentactin filamentInterproscan
GO:0032587
all species →		Cellular Componentruffle membraneInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan
GO:0051017
all species →		Biological Processactin filament bundle assemblyInterproscan
GO:0097178
all species →		Biological Processruffle assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18617AIF1; allograft inflammatory factor 1-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP