Detailed information of evm.model.Ap1.3774 in Astrangia poculata

Genomic Location: Ap1:39166794...39172690
NR annotation: KAJ7375459.1, peptidyl-tRNA hydrolase protein 1 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BW00Probable peptidyl-tRNA hydrolase OS=Mus musculus OX=10090 GN=Ptrh1 PE=2 SV=1
Q86Y79Peptidyl-tRNA hydrolase OS=Homo sapiens OX=9606 GN=PTRH1 PE=1 SV=1
Q88Z39Peptidyl-tRNA hydrolase OS=Lactiplantibacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) OX=220668 GN=pth PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007228 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01195
all species →		Pept_tRNA_hydroPeptidyl-tRNA hydrolaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036416
all species →		Homologous_superfamilyPeptidyl-tRNA hydrolase superfamilyInterproscan
IPR001328
all species →		FamilyPeptidyl-tRNA hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17224
all species →		PEPTIDYL-TRNA HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004045
all species →		Molecular Functionaminoacyl-tRNA hydrolase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01056PTH1, PTRH1, pth, spoVC; peptidyl-tRNA hydrolase, PTH1 familyEC:3.1.1.29
Translation factorsko03012deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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