Detailed information of evm.model.Ap1.3779 in Astrangia poculata

Genomic Location: Ap1:39209731...39210681
NR annotation: KXJ07654.1, hypothetical protein AC249_AIPGENE25785 [Exaiptasia diaphana]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000249 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04434
all species →		SWIMSWIM zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007527
all species →		DomainZinc finger, SWIM-typeInterproscan
IPR039903
all species →		FamilyE3 ubiquitin-protein ligase Zswim2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21540
all species →		RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.3779.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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