Detailed information of evm.model.Ap1.39 in Astrangia poculata

Genomic Location: Ap1:361016...369908
NR annotation: XP_027044858.1, tropomyosin-like [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P42637Tropomyosin-1 OS=Schistosoma mansoni OX=6183 PE=2 SV=1
Q26519Tropomyosin OS=Schistosoma japonicum OX=6182 PE=2 SV=1
Q23758Tropomyosin OS=Clonorchis sinensis OX=79923 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002692 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00261
all species →		TropomyosinTropomyosinCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000533
all species →		FamilyTropomyosinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19269
all species →		TROPOMYOSINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005884
all species →		Cellular Componentactin filamentInterproscan
GO:0006936
all species →		Biological Processmuscle contractionInterproscan
GO:0007015
all species →		Biological Processactin filament organizationInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.39.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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