Detailed information of evm.model.Ap1.3952 in Astrangia poculata

Genomic Location: Ap1:40420449...40421765
NR annotation: KXJ17830.1, ATP-dependent DNA helicase PIF1 [Exaiptasia diaphana]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001036 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap1.3952. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR050704
all species →		FamilyOTU domain-containing ubiquitin thioesteraseInterproscan
IPR003323
all species →		DomainOTU domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12419
all species →		OTU DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579
all species →		Biological Processprotein deubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.3952.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP