Detailed information of evm.model.Ap1.4008 in Astrangia poculata

Genomic Location: Ap1:41104723...41117740
NR annotation: XP_020623251.1, twitchin-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001954 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00531
all species →		DeathDeath domainDomainInterproscan
PF00041
all species →		fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000488
all species →		DomainDeath domainInterproscan
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR011029
all species →		Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR050964
all species →		FamilyStriated Muscle Structural and Regulatory ProteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13817
all species →		TITINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0007165
all species →		Biological Processsignal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.4008.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP