Genomic Location: Ap1:41796903...41800740
NR annotation: XP_020625122.1, peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap1.4070 |
| Transcript |
| evm.model.Ap1.4070 |
| Protein |
| evm.model.Ap1.4070 |
| UniProt accession | Description |
|---|---|
| Q5BIN5 | Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Bos taurus OX=9913 GN=PIN1 PE=2 SV=1 |
| Q13526 | Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Homo sapiens OX=9606 GN=PIN1 PE=1 SV=1 |
| Q9QUR7 | Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus musculus OX=10090 GN=Pin1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0008728 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00639 all species → | Rotamase | PPIC-type PPIASE domain | Domain | Interproscan |
| PF00397 all species → | WW | WW domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR046357 all species → | Homologous_superfamily | Peptidyl-prolyl cis-trans isomerase domain superfamily | Interproscan |
| IPR000297 all species → | Domain | Peptidyl-prolyl cis-trans isomerase, PpiC-type | Interproscan |
| IPR001202 all species → | Domain | WW domain | Interproscan |
| IPR036020 all species → | Homologous_superfamily | WW domain superfamily | Interproscan |
| IPR051370 all species → | Family | Peptidyl-prolyl cis-trans isomerase Pin1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10657 all species → | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003755 all species → | Molecular Function | peptidyl-prolyl cis-trans isomerase activity | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
evm.model.Ap1.4070.Transcript abundance of evm.model.Ap1.4070 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
