Detailed information of evm.model.Ap1.4097 in Astrangia poculata

Genomic Location: Ap1:42003913...42014820
NR annotation: XP_020625037.1, integrator complex subunit 5-like isoform X1 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004082 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14838
all species →		INTS5_CIntegrator complex subunit 5 C-terminusFamilyInterproscan
PF14837
all species →		INTS5_NIntegrator complex subunit 5 N-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040316
all species →		FamilyIntegrator complex subunit 5Interproscan
IPR029444
all species →		DomainIntegrator complex subunit 5, C-terminalInterproscan
IPR029445
all species →		DomainIntegrator complex subunit 5, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31697
all species →		INTEGRATOR COMPLEX SUBUNIT 5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0032039
all species →		Cellular Componentintegrator complexInterproscan
GO:0034472
all species →		Biological ProcesssnRNA 3'-end processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.4097.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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