Detailed information of evm.model.Ap1.4141 in Astrangia poculata

Genomic Location: Ap1:42381104...42386832
NR annotation: XP_020620029.1, uncharacterized protein LOC110057776 isoform X2 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010317 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05181
all species →		XPA_CXPA protein C-terminusDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009061
all species →		Homologous_superfamilyPutative DNA-binding domain superfamilyInterproscan
IPR037129
all species →		Homologous_superfamilyXPA domain superfamilyInterproscan
IPR000465
all species →		FamilyXPA/RAD14Interproscan
IPR022656
all species →		DomainXPA, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10142
all species →		DNA REPAIR PROTEIN COMPLEMENTING XP-A CELLSInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000110
all species →		Cellular Componentnucleotide-excision repair factor 1 complexInterproscan
GO:0000715
all species →		Biological Processnucleotide-excision repair, DNA damage recognitionInterproscan
GO:0003684
all species →		Molecular Functiondamaged DNA bindingInterproscan
GO:0006284
all species →		Biological Processbase-excision repairInterproscan
GO:0006289
all species →		Biological Processnucleotide-excision repairInterproscan
GO:0033683
all species →		Biological Processobsolete nucleotide-excision repair, DNA incisionInterproscan
GO:0070914
all species →		Biological ProcessUV-damage excision repairInterproscan
GO:1901255
all species →		Biological Processnucleotide-excision repair involved in interstrand cross-link repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap1.4141.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP